Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02605 ATGACGACGATGGATCCGCTGATGACGCCGTTGGGGCAAATGCTATTGGAGGAGATCACTCCGGTGGTGATGCTCATTTCAACTCCGTCTGTCGAAGAAGCTTCCCGCAAAAACGGCCTCTCCTTCCTCCAGATGCTAACGCCGTTCTGCTCTTTCGACAACATCGACGTGCCTGTTAGGACTGCCAGTGACCAACCCTATCGCCTTCACAAGTTCAAATTGCGCTTGTTCTACGCTTCCGATGTTAAGAGGCCCGATTTGAAGGAAGCCAAAGAGCAATTGAAGCAAGTTATCTCGGAGGCAGGGGAGAAAGAGTTTCCTGATTCGAATTCAGATTTGCCGAAAATTAATCTTGAACTTTCCTCGAGTTCCGAATACGAAAATACACCATCCTGGTTCCGGTTTCTCAATAAAGAGCTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCCGTGATATGTCTTCTTGCTGTCTCTTCTAAGGATGAGCAACCTATTAACAGATTTGTTGACTTTTTTAATACCAATAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAGTTTCAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGTCCTGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGTACAAGCGATTGTACGTTGCTTTGTATTAATTCATCCCTGGATGGTCCATTCAAACATCAAGATAATCCTTGGGCTTCATACATAACTAATTCCTCATCTAGTCCCACTCAAGATCTTGGTTGCTTTCTTAAAATGGATGATATCGATGAGATTAAAGTTCTAATGCAAGATTTATCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGTATACTCAACCAACAGGTTTCCGCAACACGGAAAGGGTTTAGAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCTCAATGGTCCAGCGTATAACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCTTGGAAGCGCTATGCTGGTGTGCAGGAAATGATGGGGCTTACTTACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAACGCATTTAACACATATTTAAAACTTGGATCATTGGGTCAGCTAAATGCAACACGATGTGGCCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATTAAACATGCAATTCGAACCTACAGATGTGCTCTTTCTGTTTTCAAAGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCCCTTGGGATGTATGACGTAGCTGTCAAGCATATGACAGAAATTTTGTACTGTAGCCACCAGTCCAAGACAACACAGGAATTATTCCTAAGCGACTTTCTTCAAATTGTGCAGAAAACTGGACGGACATTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTACACTCAGGGTAATACACGAAGATCACCGGACCTTCGGATCTCCTTCAGCTGCTAACATTAGAGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGCTACCGTCATTCTCTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATATTAAAAAAGCATAATCAAAATGTTTGTGTTGCAGGCGAAGCTGTGAAGGTGACTATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTACTGTTACACTCGTATGCAAGTATTCTTCCAGTACTGATGAAGTGATATCAAATGAAAATGAGTCAAGTATGGAGAAAGATAATAAAGTTGACCGCTTTAGAAATATGAGCTCTGACAATTCCTCATTTATGGTGTCTGAGGTTGATTTCTTACTAGGAGGTGGTGAAACAACCATGATCCAACTATCAGCTACTCCCAAGGAAGAGGGTACTCTTGAAATTATTGGTGTTAGGTGGAAACTGTCTGGGACAATTGTGGGCTTTTACAACTTTGAGTTGGGTCAACCAAAGAAGAATATTTTAAAAAGAAGGACAACAAAGCACCATCCAAATGAGAAATTTAAATTTATGGTGATTAAGAGCATACCCAAGCTTCAGGGTTCCATCCACCCTTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTGGAATTGAGGAATCCATCGGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGGTTCCTTATAATTGGGAAGCAGGAAAATATGATGTCGGAGTTTCCTGCATGTTTAAGAAAGAATACAGATTCAGTCCAAAGTGTTATGCATGATAATCCTAATATCACTACTGACACAGTATTTTTGTTTCCAGAGGGTACATCAGTTCAAGGTGAAACACCTTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATATCTCTTTGCATGAGCATATATTATGAGATAGGAGATGTATCAAGTATCATCAAGTATCGCACTCTACGCTTGCATTACAATGTGCAGGTGTTACCGTCATTGGATGTCTCATTTCAAATCTGTCCTTTCCGATCAAGATTGGAAGAATTTCTTGTTCGATTGGATGTTGTTAATAAGACTAGCTCAGAAAGTTTCCAAGTTTGTCAGTTGTCATCAGTTGGTCACCAATGGGAAATCTCATTAGTTCAAGCTCCGGATAGTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAATATCATGTTTCTATACACTAAAGGTTTGTAAGGCTTTCGACATTGGGGATGACGTGTCTACATCCCCTGTCAGAAGTGATGCAAGATTGGTACCACAAATCATTGAGGATATAGTTTATGATGTAAATAGTGCACCTTTGGTCAATTTCCACCATCATGAAAGATTGCAGCAGGAAGTTTCATCCAAGGGTGACATAAATACTGTGGATTTTGTATTAATCTATCGGCCATTTAGGAGTAGCGACGATCCTGGTTTATCCACTCCTTCGTCTGTAATGTCCCATCACGCGTGCCACTTCAGTACTGCTAGCACGGGCCCCATTTCATGGCTAGTGGATGGACCTCAAACCATGCATCACGACTTCTCCGCATCATTCTGTGAAATAAATATGAAGATGCATATTTACAATTCATCTGGCGCCACTACTTTTGTACGCATTGACACCTTAGATTCAGCTGGTAATGGTGGACATATAAACAGTGTAAATGTGGTTCAATCTGCAACTACCGATAACCAAGCAGGATGGCACGATATCACCCCAGTGAATGAACTTAAAGTCACCTCAAATGCTCTCGAAACCCAATCAGGAAAAGCACTATCATTGGAAAGTGCCTCCTCATATATTTGGTCTGGATCAAGCTCAACCCATCTCAACATTGAGGCCATGTCCTCGGTAGAAATTCCTCTTCAGATCTGTGTATTCTCTCCTGGGACATATGATCTGTCAAATTACGTTTTGAATTGGAAACTTCCATCCAATGGACAGGGAGATAGTGATGAAAAGAGGCAGCATTCAGGCCAGTGCCAGGGGTATAAATATTATCTTACCGTTCTCCAGTCCACTTGA 3870 0.4057 MTTMDPLMTPLGQMLLEEITPVVMLISTPSVEEASRKNGLSFLQMLTPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDVKRPDLKEAKEQLKQVISEAGEKEFPDSNSDLPKINLELSSSSEYENTPSWFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINRFVDFFNTNKLPSLLNDGAMDPKVSKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCTLLCINSSLDGPFKHQDNPWASYITNSSSSPTQDLGCFLKMDDIDEIKVLMQDLSSKHIIPNMEQKIRILNQQVSATRKGFRNQIKNLWWRKGKEDGADSLNGPAYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRCALSVFKGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILYCSHQSKTTQELFLSDFLQIVQKTGRTFEVTKLQLPVINISTLRVIHEDHRTFGSPSAANIREGLWRSLEEEMLPSFSAAKTNWLELQSKLILKKHNQNVCVAGEAVKVTIEFKNPLQISIPISTVTLVCKYSSSTDEVISNENESSMEKDNKVDRFRNMSSDNSSFMVSEVDFLLGGGETTMIQLSATPKEEGTLEIIGVRWKLSGTIVGFYNFELGQPKKNILKRRTTKHHPNEKFKFMVIKSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKQENMMSEFPACLRKNTDSVQSVMHDNPNITTDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLCMSIYYEIGDVSSIIKYRTLRLHYNVQVLPSLDVSFQICPFRSRLEEFLVRLDVVNKTSSESFQVCQLSSVGHQWEISLVQAPDSIFPSQSLMAGQAISCFYTLKVCKAFDIGDDVSTSPVRSDARLVPQIIEDIVYDVNSAPLVNFHHHERLQQEVSSKGDINTVDFVLIYRPFRSSDDPGLSTPSSVMSHHACHFSTASTGPISWLVDGPQTMHHDFSASFCEINMKMHIYNSSGATTFVRIDTLDSAGNGGHINSVNVVQSATTDNQAGWHDITPVNELKVTSNALETQSGKALSLESASSYIWSGSSSTHLNIEAMSSVEIPLQICVFSPGTYDLSNYVLNWKLPSNGQGDSDEKRQHSGQCQGYKYYLTVLQST 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02605 1289 Gene3D Tetratricopeptide repeat domain 327 559 IPR011990 GO:0005515
Viun1g02605 1289 PANTHER TRANSPORT PROTEIN TRAPP 8 1288 IPR024420 -
Viun1g02605 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 191 524 IPR024420 -
Viun1g02605 1289 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 643 833 IPR013935 -
Viun1g02605 1289 SUPERFAMILY TPR-like 435 556 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02605 K20305 - gmx:100813062 2259.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02605 1 36153785 36171166 Viun1g02605 1 36153785 36171166 ECH