Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02574 ATGGCCCTATCCCGTGGATCCATCGTCACTCGATCAGTGTGGTCCTCTAATTTGGAATCGGAGTTCGAGTTAATCCGATCCGTCATAGACTCTTTCCCTCTTATATCGATGGACACCGAGTTCCCCGGTGTGGTTGTGCGCCCCGACACCGGTGACCCCTCTTTTCGCCACCGAGAACCAGCCGCGCACTACGCCGTGCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGTCTTACTCTCTCCGATCAAGTGGGAAACCTTCCCACACTCGGCACCTCCAACGGCTTCGTCTGGGAGTTCAACTTCCGAGACTTCGACGTCTCGCGTGACGCCCATGCTCACGACTCCGTCGAGTTGCTACGGCGTCAGGGCATCGATTTTGAGAAGAATCGGGAGTTTGGGATCGACTCGGTCCGGTTCGCCGAGCTTATGATGTCCTCTGGTCTGGTCTGTGATGACCCAGTTAGTTGGGTGACGTTTCACAGTGCATATGATTTCGGGTACCTGGTGAAATTGTTGACCCAGCGCGCTCTGCCGGAGGAATTGGCAGAATTTCTCCGCCTGGTGAGGGTTTTTTTCGGTGACAGAGTTTTTGATGTGAAACACTTGATGAAGTTCTGCTCAAATCTTCATGGAGGTTTGGACCGAGTATGCCAATCGCTGAATGTGGAAAGAGTTGTGGGGAAAAGCCACCAGGCTGGTTCCGATAGCTTGCTCACCCTGCACGCTTTTCAGAATATAAGGGAGGTTTATTTTGGCAAGGCTGATGGACTTATTCAGTATGCTGGTGTCTTGTATGGTTTGGAGGTTTTCTAA 825 0.5236 MALSRGSIVTRSVWSSNLESEFELIRSVIDSFPLISMDTEFPGVVVRPDTGDPSFRHREPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNGFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDPVSWVTFHSAYDFGYLVKLLTQRALPEELAEFLRLVRVFFGDRVFDVKHLMKFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLIQYAGVLYGLEVF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02574 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Viun1g02574 274 FunFam Putative CCR4-associated factor 1 7 1 274 - -
Viun1g02574 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 9 272 IPR039637 GO:0004535|GO:0030014
Viun1g02574 274 SUPERFAMILY Ribonuclease H-like 5 272 IPR012337 -
Viun1g02574 274 Gene3D - 2 273 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02574 Viun-Chr1 35893821 35895093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02574 K12581 - gmx:100790027 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02574 1 35893821 35895093 Viun1g02574 1 35893821 35895093 ECH