Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02573 ATGACGCTTGGCTCTGCGGGATCCAGTGTCGTGGTTCCGAGGAACTTCAGATTGCTGGAGGAACTTGAAAAGGGAGAAAAAGGAATTGGAGATGGCACAGTTAGCTACGGAATGGATGATGGTGATGATATTTACATGCGCTCTTGGACTGGCACCATTATTGGCCCCTATAATACTGTACACGAAGGAAGAATTTATCAATTGAAGTTGTTTTGTGATAAAGATTACCCAGAAAAGCCTCCAACTGTTCGGTTTCATTCCCGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGCAAACTGGCAACGAAGGTTTACCATGGAAGATATATTGACCCAAATGAAGAAGGAAATGGCAGCTTCACATAACCGCAAGCTTATCCAGCCTCCCGAAGGTACTTGCTATTAG 441 0.4286 MTLGSAGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHETGVVESKKFGLLANWQRRFTMEDILTQMKKEMAASHNRKLIQPPEGTCY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02573 146 Gene3D Ubiquitin Conjugating Enzyme 3 146 IPR016135 -
Viun1g02573 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Viun1g02573 146 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 4 146 - -
Viun1g02573 146 SMART ubc_7 16 144 - -
Viun1g02573 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 132 - -
Viun1g02573 146 Pfam Ubiquitin-conjugating enzyme 43 131 IPR000608 -
Viun1g02573 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02573 Viun-Chr1 35882739 35886644 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02573 K10704 - gmx:100789495 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02573 1 35882739 35886644 Viun1g02573 1 35882739 35886644 ECH
Viun1g02573 1 35882739 35886644 Viun7g00154 7 1052718 1055932 PCT