Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02548 ATGGTTTTCCCTAAGTGTAGCACTGTTTTTCTTTTTCTTTTATGGCTTCTATTACTCATCAACAATGGCGTTGAAGCTCTTCATAAAATATATCCGCATCTTCAATCCGTTTCAGCAATTTCCGTCGGTACACAACACAGAACTGGATACCATTTTCAACCTCCTAGACACTGGATCAATGATCCAAATGGACCCATGTATTTCAACGGATTCTACCATTTGTTCTATCAATACAATCCGAATGGTTCGGTGTGGGGGAACATAGTGTGGGCACACTCAGTATCCAAGGATCTCATAAACTGGGAATCTTTAGAACACGCGCTCTACCCATCCAAGTCCTTCGACAAATACGGGTGTTGGTCGGGCTCAGCGACAATAGTCCCAGGTATCGGACCCGTGATCCAGTACACCGGTGTCGTAGACGAGAAACAAACTCAAGTCCAATGTTACGCAATACCCGCAGACCTCAAGGACCCGCGCCTCCGAAAATGGGTAAAACCCGATGATATGAACCCGTTTTTGGTGGCGGACAAACCCGTGAACGGTAGTGCGTTTAGGGACCCGACAACGGCATGGTGGAGCAAAGATGGGCACTGGAGAATGGTGGTGGGGAGCAGAAAGAAGGATAGAGGAGTGGCTTATATGTACAGAAGCAGAGACTTTAAGAAATGGGTCCGGTCCCAACACCCGCTCCATTCGAAAAAGGACACGGGTATGTGGGAGTGCCCAGATTTTTACCCCGTTTCGCTTAAAAGCAATTTGGGGTTGGACGCGTCGGCGGAGGGAGAGCATATGAAACACGTGCTGAAAAACAGTCTTGATGTGACTAGGTACGAGTACTACACTGTGGGAACGTATCGTAGGGATAAGGATAGGTATGTTCCTGACAAAACATCCGAAGATGGTTGGGGTGGATTAAGGTATGATTATGGTAACTTTTATGCTTCCAAGTCCTTTTTTGACCCTAGCAAGAACAGAAGAGTTATCTGGGGTTGGGCCAACGAGTCTGATACCAAAGAAGATGATGTTCGTAAAGGATGGGCTGGGATTCAGGCGATTCCGCGAACGGTGTGGCTGGATCCAAATCAGAGGCAACTGTTACAGTGGCCAGTTGAAGAATTGAATAATCTCAGAGGAAAAGAAGTTACCCTGAACAAACAGAAGCTTCAGAAAGGAGAGAAAGTTGAAGTAAAAGGAATCTCTGCTGCACAGGCAGATGTTGAGCTTGAATTTTCATTTTCAAGTTTGGACAAGGCAGAGAAGTACGATGATAAGTGGGTAGATGCACAGGAAGCTTGTGCCAATAAGGGTTCAAATGTGGAAGGTGGTGTTGGACCATTTGGACTTTTGACATTTGCTTCTGAAAAGCTGGAGGAGTTTACTCCTGTTTTCAGAATTTTCAAAGATAAAAAGAAGCATGTCATTCTCATGTGCTCCGATGCAAGAAGATCGTCTTTAAAAGCTGATCTGTACAAGCCATCATTTGGTGGCTTTGTAGACTTGGATTTGACAAAGGATAAGAAAATTTCGCTCAGGAGTTTGATTGATCACTCGGTAGTGGAAAGTTTTGGAGCAGGAGGAAAGACAATAATATTGTCTCGAGTTTATCCACAGCTTGCAGTGTTAAGTGAAGCTCATCTTTTTGTGTTCAACAATGGCACTGAACCAATCACCGTGGAAAAGTTAAAAGGATGGAACATGAAATCTGCTCAAATAAAATGA 1722 0.4448 MVFPKCSTVFLFLLWLLLLINNGVEALHKIYPHLQSVSAISVGTQHRTGYHFQPPRHWINDPNGPMYFNGFYHLFYQYNPNGSVWGNIVWAHSVSKDLINWESLEHALYPSKSFDKYGCWSGSATIVPGIGPVIQYTGVVDEKQTQVQCYAIPADLKDPRLRKWVKPDDMNPFLVADKPVNGSAFRDPTTAWWSKDGHWRMVVGSRKKDRGVAYMYRSRDFKKWVRSQHPLHSKKDTGMWECPDFYPVSLKSNLGLDASAEGEHMKHVLKNSLDVTRYEYYTVGTYRRDKDRYVPDKTSEDGWGGLRYDYGNFYASKSFFDPSKNRRVIWGWANESDTKEDDVRKGWAGIQAIPRTVWLDPNQRQLLQWPVEELNNLRGKEVTLNKQKLQKGEKVEVKGISAAQADVELEFSFSSLDKAEKYDDKWVDAQEACANKGSNVEGGVGPFGLLTFASEKLEEFTPVXFRIFKDKKKHVILMCSDARRSSLKADLYKPSFGGFVDLDLTKDKKISLRSLIDHSVVESFGAGGKTIILSRVYPQLAVLSEAHLFVFNNGTEPITVEKLKGWNMKSAQIK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02548 574 SUPERFAMILY Concanavalin A-like lectins/glucanases 370 571 IPR013320 -
Viun1g02548 574 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 382 568 - -
Viun1g02548 574 Gene3D Glycosyl hydrolase domain; family 43 56 383 IPR023296 -
Viun1g02548 574 Gene3D - 384 568 - -
Viun1g02548 574 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 55 382 - -
Viun1g02548 574 SUPERFAMILY Arabinanase/levansucrase/invertase 42 371 IPR023296 -
Viun1g02548 574 ProSitePatterns Glycosyl hydrolases family 32 active site. 51 64 IPR018053 GO:0004553|GO:0005975
Viun1g02548 574 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 18 573 - -
Viun1g02548 574 Pfam Glycosyl hydrolases family 32 C terminal 373 566 IPR013189 -
Viun1g02548 574 CDD GH32_Fruct1-like 57 359 - -
Viun1g02548 574 SMART glyco_32 51 528 IPR001362 GO:0004553|GO:0005975
Viun1g02548 574 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 370 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02548 Viun-Chr1 35688371 35692787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02548 23 568 Glycoside Hydrolase AT2G36190 63.978 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02548 K01193 - gmx:100799008 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02548 1 35688371 35692787 Viun1g02548 1 35688371 35692787 ECH