Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02545 ATGAGCAGATCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTCCAGATCAAACTGAATGCTAATCGCATGATTGTTGGTACTCTCCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACCGTGGAAGTGAATGGCAATGAGAAAACTGACATAGGGATGGTGGTAATTAGAGGAAACAGTGTGGTCACTGTTGAGGCGCTTGAACCCGTGAACAGAACCTGA 240 0.45 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEALEPVNRT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02545 79 Pfam LSM domain 9 71 IPR001163 -
Viun1g02545 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Viun1g02545 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 3 78 IPR044641 -
Viun1g02545 79 PIRSF Lsm7 5 78 - -
Viun1g02545 79 SMART Sm3 8 72 IPR001163 -
Viun1g02545 79 Gene3D - 1 76 - -
Viun1g02545 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Viun1g02545 79 ProSiteProfiles Sm domain profile. 5 76 IPR047575 GO:0003723
Viun1g02545 79 FunFam Small nuclear ribonucleoprotein G 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02545 Viun-Chr1 35661921 35663592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02545 K11099 - gmx:100305530 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02545 1 35661921 35663592 Viun1g02545 1 35661921 35663592 ECH