Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02532 ATGTTTCCTGTTTGCAACGTTTCTCCTCTTTCTCTGCAACCGGGCATGGTGATTCCGATTCCTGGAAAACCTACCGGACAGTCTTCGTTTCTCTCTGTCACGAACTCCGCGTCTTCCGGCGAGAGAATCAGCACGCGCCCAAGTACCATTTCGCCATTCGAATCTCGAATCTCACTCGTTTTCGCTCTCGCTTCTCAAGCCAACTCTCTCACCCAGCGACTTCTAGCTGACGTCGCTGCCGAGACTGCCAAATACTTGTTTCCGAAGAGATTCGAAAGCCGTAATCTCGAGGAGGCGTTGATGAGTGTTCCGGACCTTGAGACTGTCCAGTTCAAGGTTTTGAGCAGAAGGGACCAGTATGAGATTCGGGAAGTTGAGCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGGGGATTTGATTTCAATGGTGCTTCTCGGTCCTTTAATGTCTTAGCTGAGTACCTTTTCGGTAAGAATATAAAGAATGAGAAAATGGAGATGACTACACCTGTTTTCACTAGTGAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCTGTGCTAACAACAAAGATTGAAGATCAAGACAAGTGGAGAATGTCTTTCGTCATGCCATCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGACAATTAAAGAGGTGCCCAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTGAATGATGAAGAAATTAAGCAGCGCGAACTGAAACTACGAGAAGCTTTAAAAAGTGATAGTCAGTTTAAGATTAAAGAAGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAATAATAAGTAG 906 0.4404 MFPVCNVSPLSLQPGMVIPIPGKPTGQSSFLSVTNSASSGERISTRPSTISPFESRISLVFALASQANSLTQRLLADVAAETAKYLFPKRFESRNLEEALMSVPDLETVQFKVLSRRDQYEIREVEPYFVAETTMPGKRGFDFNGASRSFNVLAEYLFGKNIKNEKMEMTTPVFTSENQSDGVKMDMTTPVLTTKIEDQDKWRMSFVMPSKYGANLPLPKDSSVTIKEVPRKIVAVVSFSGFVNDEEIKQRELKLREALKSDSQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWNNK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02532 301 SUPERFAMILY Probable bacterial effector-binding domain 177 296 IPR011256 -
Viun1g02532 301 Gene3D Regulatory factor, effector binding domain 179 301 IPR011256 -
Viun1g02532 301 Gene3D Regulatory factor, effector binding domain 105 178 IPR011256 -
Viun1g02532 301 Pfam SOUL heme-binding protein 177 294 IPR006917 -
Viun1g02532 301 Pfam SOUL heme-binding protein 106 175 IPR006917 -
Viun1g02532 301 PANTHER HEME-BINDING PROTEIN-RELATED 74 175 IPR006917 -
Viun1g02532 301 SUPERFAMILY Probable bacterial effector-binding domain 101 177 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02532 Viun-Chr1 35587524 35593378 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02532 - - gmx:100797412 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02532 1 35587524 35593378 Viun1g02532 1 35587524 35593378 ECH