Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02520 ATGGACCACCTTCCCGTGGAGGTGATCGGTAACATATTGTCTCTTCTCGGCTCTGCCCGGGATGTAGTGGTTGCTTCTGCAACTTGCAAGAAATGGAAGGAAGCATGGCGCAGTCACCTCCACAGTCTTTCTTTCAATTTTAGTGATTGGCCTCCATATCATGACTATACCTCTTCTAGGTTGGAAATACTCATCACTCAGACCATTTTTCAAACCAAGGCACTGCAGTTTTTGACCATTTTCATGGATGATGAGCGTGAGTTCTCTGCCGCCCCCGTCATTGCTTGGCTTATGTATACTAGGGATTCCTTGCGCCAATTGCATTACAATGTAAGGACTACCCCTAGTTTCAACATCATCGAGAAATGCAGTAGACATAGGCTGGAGGTGCTGGCATTGGCTCGCAATTCCATCATTGGTGTTGAGCCAGGTTATTTGAAGTTTCCTTGCTTGAAGTCGCTTTCGTTGAGTTTTGTTAGCATCTCGGCGTTGGATTTGAGTCTTCTGATGTCGTCTTGTCCAAAGCTTGAAACATTGGCCATGGTTAGTCCAGAGATTGCAACATCAGATTCTCATGCTTCTGTGGATCTTAACAGTGTCTCTTTGAAGGATTTCCACCTTGAATTGTTTAGCTCGGATAAGTTTATATTGGAGGTGGATTTGCTCGAGAAACTTCATTTGAAAGAATGTACCTTTGAGGTTTTTGAGCTGGTTGGAAAGGGGACACTGAAAGCGTTGAAAATTGATGACGTGAGTGTTATCCATCTCGATATTGCGGATAGTACGGAGAACCTTGAGATTATAGATGTCTGTAACTTCACAATCATGTGGCCAAAATTTTATCACATGATCTCAAAAGCATCGAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTCGATATAGAGACAATTTCTGTTTGCTTTCCTCTATTGACGCATATGTCGTTAAGTTATGATTTAAGAGACGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTGTTTGATGAATGTGGTGGTGTTAGAACTTGGATGGACTGTAATAAGTGATCTTTTCTCGGTTTGGGTAGCTGGACTTTTGGAAGGATGTCCCAATTTGAAAAAATTGGTCGTACATGGTTATGTTTCAGATGTCAAAACACATGAAGAGTGCCAAATTCTTGCCAGATTCTCTGAATTCATTCTTCAACTAGGAAGAAAATACGGGCATGTAAAATTTGAGTTTGAATATGAGTAG 1260 0.4183 MDHLPVEVIGNILSLLGSARDVVVASATCKKWKEAWRSHLHSLSFNFSDWPPYHDYTSSRLEILITQTIFQTKALQFLTIFMDDEREFSAAPVIAWLMYTRDSLRQLHYNVRTTPSFNIIEKCSRHRLEVLALARNSIIGVEPGYLKFPCLKSLSLSFVSISALDLSLLMSSCPKLETLAMVSPEIATSDSHASVDLNSVSLKDFHLELFSSDKFILEVDLLEKLHLKECTFEVFELVGKGTLKALKIDDVSVIHLDIADSTENLEIIDVCNFTIMWPKFYHMISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPLLTHMSLSYDLRDGVLHYGLQGLSCLMNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVVHGYVSDVKTHEECQILARFSEFILQLGRKYGHVKFEFEYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02520 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Viun1g02520 419 PANTHER F-BOX PROTEIN-LIKE 3 381 - -
Viun1g02520 419 SUPERFAMILY RNI-like 115 382 - -
Viun1g02520 419 Gene3D Ribonuclease Inhibitor 82 403 IPR032675 -
Viun1g02520 419 SUPERFAMILY F-box domain 2 67 IPR036047 GO:0005515
Viun1g02520 419 Pfam F-box-like 1 36 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02520 Viun-Chr1 35533625 35535687 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02520 - - gmx:100792331 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02520 1 35533625 35535687 Viun1g02520 1 35533625 35535687 ECH