Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02514 ATGTTGGTGCAAAGAATGTGCACGCTAGGGTTCTTGCTAATCGTCGGAATCTTCGAACTCGATGCCGTTCATGGTTACAATCGACCACCACCTCGTCAAAACCTCGTTATTCCAAACGCGGATCACCCGGACTCGCCACAACAGGTACACATATCTCAAGTGGGCCAAAACAAGATGAGGATATCGTGGATCACAGAGAGCCCAACTTCACCAAAGGTTTGGTACGGTCCATCTCCTTCAGCAAATGCATTAGCTGTCACGGGGACAACCTCTTCCTACCATTACCTCCTTTACAAGTCCGGTGAAATTCACGACGTTGTAATTGGTCCCCTCAACCCCAACACTCTCTACTACTACCGTTTGGGTGACCCACCGTCTTCCGAAACATACACCTTCAAGACTCCACCTTCTCAACTTCCCATCAAGTTTGCAGTAGTTGGAGATCTTGGACAAACGGATTGGACGAGTTCGACCTTGGAGCATGTGGGTAAGTCAAACTACGACATGTTGATTCTACCCGGTGACCTGTCCTACGCAGACTTTCTTCAACCTCTATGGGACTCCTTTGGTCGATTGGTGGAACCTTTAGCTAGCCAGCGTCCTTGGATGGTCACCCAAGGCAACCATGAAGTGGAGAAGCTTCCTCTCATTCACTCAGAGCGTTTCACAGCGTACAACGCCCGATGGCGCATGCCCTTCGAACAAAGTGGATCAGACTCTAACCTTTACTATTCTTTCGATGTTGCCGGTGTTCATGTCATCATGCTTGGTTCCTACACCAAATTTGACCCTTCTTCTCCGCAGTACAATTGGCTTAAATCTGACTTGAAAAAGGTTAACAGAGGAAACACTCCATGGGTGGTGGTGCTTGTTCACGCCCCTTGGTACAACTCCAACACCGCTCATCAGGGTGAATCTGAATCCGTTCAAATGAAAGCTTCCATGGAAGACTTGCTCTTCCAAGCCCGTGTCGATGTTGTTTTTGCAGGCCATGTTCACGCTTATGAACGTTTTACACGGGTTTATAAAGACAAAGCTAACAATTGTGGTCCAGTGTATATCACAATCGGGGACGGGGGTAACCGTGAAGGCCTTGCTAATAAGTACATAGATCCTAAGCCAGCGATATCAATGTTCAGGGAGGCTAGCTTTGGACACGGTATATTGGAAGTAGTTAATGCATCTCATGCACAGTGGACATGGCATCAGAACGATAACGATGAAGCGGTTGTTAGTGATAGTATCTGGCTTACGAGTTTCTCCTCCAATCCTTCTTGTAAACAGTGA 1287 0.4747 MLVQRMCTLGFLLIVGIFELDAVHGYNRPPPRQNLVIPNADHPDSPQQVHISQVGQNKMRISWITESPTSPKVWYGPSPSANALAVTGTTSSYHYLLYKSGEIHDVVIGPLNPNTLYYYRLGDPPSSETYTFKTPPSQLPIKFAVVGDLGQTDWTSSTLEHVGKSNYDMLILPGDLSYADFLQPLWDSFGRLVEPLASQRPWMVTQGNHEVEKLPLIHSERFTAYNARWRMPFEQSGSDSNLYYSFDVAGVHVIMLGSYTKFDPSSPQYNWLKSDLKKVNRGNTPWVVVLVHAPWYNSNTAHQGESESVQMKASMEDLLFQARVDVVFAGHVHAYERFTRVYKDKANNCGPVYITIGDGGNREGLANKYIDPKPAISMFREASFGHGILEVVNASHAQWTWHQNDNDEAVVSDSIWLTSFSSNPSCKQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02514 428 SUPERFAMILY Purple acid phosphatase, N-terminal domain 41 136 IPR008963 GO:0003993|GO:0046872
Viun1g02514 428 CDD MPP_PAPs 140 419 IPR041792 -
Viun1g02514 428 CDD FN3 43 134 IPR003961 GO:0005515
Viun1g02514 428 SUPERFAMILY Metallo-dependent phosphatases 140 408 IPR029052 -
Viun1g02514 428 Pfam Iron/zinc purple acid phosphatase-like protein C 350 410 IPR025733 -
Viun1g02514 428 Gene3D - 45 137 - -
Viun1g02514 428 Pfam Calcineurin-like phosphoesterase 142 335 IPR004843 GO:0016787
Viun1g02514 428 PANTHER ACID PHOSPHATASE RELATED 26 418 IPR039331 GO:0003993
Viun1g02514 428 Gene3D - 138 426 IPR029052 -
Viun1g02514 428 Pfam Purple acid Phosphatase, N-terminal domain 46 134 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02514 Viun-Chr1 35488376 35491795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02514 44 409 Miscellaneous Gene Families AT2G03450 27.752 5.54e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02514 K22390 - gmx:100794764 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02514 1 35488376 35491795 Viun1g02514 1 35488376 35491795 ECH