Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02513 ATGATGGGAAAATGTCGCAGAAGGTCTCTTATGGAATTCCCCATCCTCCTCGTACACATCTTATGCCTCCTTTTGTTCCCACAGCCTCTACTCTCTGGACACAACTATTTTGTTCGTCAGCCAGCTGGTCAACTCATCATCACACCACATCAACGCTCCCATTCTGATCCGCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACGGAAGAGAAGCACGCAGAATCTGTGGTGGAGTACGGAACAGAGTCAGGGGAATATAGCGAGAAATACGGGGAGCATACCTCGTACCGATATTTTTTGTATAATTCCGGCAAGATTCACAACGTTGTTATTGGTCCTTTGAAACCAGGCACCACTTACTTCTACAGGTGTGGAGGGTCGGGTCCAGAGTTTTCTCTCAAGACACCTCCACCCAACTTCCCTCTTGAATTTGTCGTCGTTGGGGACTTAGGACAAACAGAATGGACTGCATCAACCTTGAAACATGTCGAAAGCAGGGAGTACGACGTTGCGTTGTTACCAGGAGATCTATCCTACGCAGACTCCCAACAACCCCTGTGGGACTCCTTTGGTCGTTTGGTGGAACCCTATGCCAGTAAAAGGCCATGGATGGTTACTGAAGGCAACCACGAGATCGAGATTTTCCCCATTATTTACCCACAACCCTTCCAAGCCTACAATGCTCGTTGGCCTATGCCCTTCCAACACAGTGCTTCCACCTCAAACCTCTATTACTCCTTCCAGCTAGTTGCTACCCATGTCATCATGCTAGGTTCCTACACTGACTTTCACGCCCAATCACAACAATACAACTGGCTCCAATCTGATCTCGCCAACATCGATAGGGTCAAAACCCCTTGGGTCATTGTGTTGTTGCATGCACCTTGGTATAACACGAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAACATTTGCTTTATGATGCTCGTGTTGACTTGGTTTTTGCTGGTCATGTTCATGCCTATGAACGCTTCACTCGAATTTACGATAACAAGTTTGATTCATGTGGACCCATGTACGTGACCATTGGAGACGGAGGAAATCGAGAGGGGCTTGCGTTAATGTTTAAGAACCCACCAAGCCCGCTCTCGTTGTACCGAGAACCAAGCTTCGGACATGGAAGGTTGAGAATAGTAAATGAAACACATGCACACTGGTCGTGGCACCGAAACAACGACACTGATGCAGTTGTTGCTGATGGCGTTTGGATAGAGAGTTTAAGCAGCTCCAAAGCATGTTCCAAACAAGATGCTCCCAACGAAGAGCTATAG 1332 0.4767 MMGKCRRRSLMEFPILLVHILCLLLFPQPLLSGHNYFVRQPAGQLIITPHQRSHSDPQQVHISLVGKEKMRVSWITEEKHAESVVEYGTESGEYSEKSXGEHTSYRYFLYNSGKIHNVVIGPLKPGTTYFYRCGGSGPEFSLKTPPPNFPLEFVVVGDLGQTEWTASTLKHVESREYDVALLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQPFQAYNARWPMPFQHSASTSNLYYSFQLVATHVIMLGSYTDFHAQSQQYNWLQSDLANIDRVKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEHLLYDARVDLVFAGHVHAYERFTRIYDNKFDSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRIVNETHAHWSWHRNNDTDAVVADGVWIESLSSSKACSKQDAPNEEL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02513 444 Gene3D - 148 436 IPR029052 -
Viun1g02513 444 CDD MPP_PAPs 147 427 IPR041792 -
Viun1g02513 444 PANTHER ACID PHOSPHATASE RELATED 16 430 IPR039331 GO:0003993
Viun1g02513 444 CDD FN3 55 132 IPR003961 GO:0005515
Viun1g02513 444 Pfam Calcineurin-like phosphoesterase 153 343 IPR004843 GO:0016787
Viun1g02513 444 SUPERFAMILY Metallo-dependent phosphatases 150 415 IPR029052 -
Viun1g02513 444 Pfam Purple acid Phosphatase, N-terminal domain 57 140 IPR015914 GO:0003993|GO:0046872
Viun1g02513 444 Gene3D - 56 147 - -
Viun1g02513 444 SUPERFAMILY Purple acid phosphatase, N-terminal domain 48 146 IPR008963 GO:0003993|GO:0046872
Viun1g02513 444 Pfam Iron/zinc purple acid phosphatase-like protein C 358 417 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02513 Viun-Chr1 35482824 35486159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02513 57 438 Miscellaneous Gene Families AT2G03450 27.371 3.63e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02513 K22390 - gmx:100819446 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02513 1 35482824 35486159 Viun1g02513 1 35482824 35486159 ECH