Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02500 ATGGAGGTCTCAGACGAAGACGACGAGCACGTTTTCCTTGTTTGTACTAACACTGATTCAATCCAAACAGCTGAAACCCTAAAGGATGAGATTCTCGTGTCCACCGCTGATATTCTCTCTTGGGATCTCCCAACGATTCTCACTTTTCCGACGATTAAAGTTCAGGCACATTCCAATATGCTCATTGAACAATCTATGTATTTCCGCGGCCTCCTCAGTGGGAACTTCAGTGAATCATGCTTGGGCTCTATCTCTATCAATTGGAATGTGAGCGAATTTTTGCAAATTCTTAAGCATATGTGTGACTGCGTTTTGGATATTACGTTGGATAATTTCTTCCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAATCACTTCTCTTGAAGTGTGAGATGTGGCTTTCTGAGGTGTTCTCACCCGAAGGATTTCAATCTACTCAAATACAAATGGAGGACTTGATCCAAATTTGGAATTTTGGCTCAGATCGTGCCAGGGACTATATCGTGCACTTATGCATGGGCTACCTAGCAAGAAATTTTATGTGGGCAAAGCGTAGCGAATTTTTTGTAAAACTTCCATATGACCTGCTGCTATCTTCTGTAAAGCACCCTCAGTTGACTGTTGACAGTGAACTGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACTTGGAAAATTTGGAGAGGCCAATCAAAACTGAAGACAATTGCATCGGAATTTTGAAACAAATTCGTGTGGGCCTTTTGCCTTTGTGGTTTGCTCTAGGAAAAAGAAACTCTTTTTATTTTAGACAGCTGGCTGAGGAAAGCCTTGATTCAATTTTCAGACTACTAAATATTGTTCCTATGGGTTCACTGGGTACTTTCAAGTATAGTGACTTGGATCATCTCAGAATTAGGTTGACAGAATATTCTAAGAAAGTGAACCTTTCTGGTTGCCCGCAAATACCATCTACTATACTTTGTCTGTCACTCATCCCTCAATCATATTTAACAGATCCCATGCAAGAGAAGATTATAGAAAAGTTGTTTTTTAATTGTAAACATCCTGTAAGAGATAGATGGGTGTTCCCACAAAATCTGTCAGAAGAAACCTTGACCTTTGAAGCAGTTCAGGAGGTGGATATCTCTAAGTGTCGAAATTTGCATGTTGAACATGCTGTTGATTGCTTCCGCAAGTCCTTTCCTTCTTTAAGAACATTGAAAGCAGGTTATCTTTTGAACATTGGGACAACCAGTTTCCTTCAGTTATTGGAGAAATGTCCGTTGGTTTGTGAAATTGACATGACTGTTGATATTACTCCACTGATACCAGCATCAGTTACAGTTTTATCCTCTAGTCCCGCTGAGGTACAGCCAGTACCAGAGAAGACCTCTAGTGCTAAATATCAAGCAGTGCAAATCATGTCATTTAATGAATTTGGACCTCCTCTTTCTAATGTTACAAAACTCACATTGGATGGAAGAACTGATGTCAGTGATTTGGGTCTCCATTACATCTCCAAATTATGTGTTTCATTGTGTCACCTGAATATTAAAGGATGCATTTCTGTTACTGATATTGGCATATCTGATCTCATTTCCACGTGTAAAAAACTTAATTCAATTGTGGTTTGTGATACTTCATTTGGGATAAATGCTGTTCAAGCTCTTTGCTCAGCTATTTCTGATAGTGGCAACACCTCTCTACATTCTAGAGATAAGCGTTTGAATTCTGTGGTGTCTAATTTTGAAACATTACACATGGGTGGCTGCCAGGGTGTTTCAAAGTCATCTCTAATCGAGCTTATGTCTCAAACGCAAGTTTTGAAGAGTTTATGCCTGAGAGGAACTGATCTGGTTGACCAGGCACTGTATAATTTTGTAGGTTCTTCCTTGGAGATGCTTGATATTTCAAATACTAAGATTTCTGGGGCTGCATTAACTCATGTTATTCAAGGAAATCCAAGTTTAAAGTGTCTGAAAGCAAGAGACTGTCGAAATTTGTTTCCTGGAGACAGTTGTACTGAAAAAAGGGAATCTGATTTACCCTCTTTGCATGAAAAACTACATGCTGAGTTAGGAAAAATGAATAGATTGGAAGAGATTGAGTTTGGATGGGGCTTTTCTTTCATCTCTTTTAGTTCTCTGGAATCTGCACTGATGTCATTAAAGGCCATCAACATTGGTTTAGGTGGAATGCTAGGTGAAGATGCTTTGAAACGGTTACCTGCAATCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGTTCCATCATTATTGCCTCCTCCAAGCATTCCACCAGACGAGTCCAGGTTTTCACCTTGAATTAGTTTCATCAGTTATAGCTAAAATGTTGTCTTTCTGA 2361 0.3935 MEVSDEDDEHVFLVCTNTDSIQTAETLKDEILVSTADILSWDLPTILTFPTIKVQAHSNMLIEQSMYFRGLLSGNFSESCLGSISINWNVSEFLQILKHMCDCVLDITLDNFFPLYEGALYFGVESLLLKCEMWLSEVFSPEGFQSTQIQMEDLIQIWNFGSDRARDYIVHLCMGYLARNFMWAKRSEFFVKLPYDLLLSSVKHPQLTVDSELHLSDALLLWLESNLENLERPIKTEDNCIGILKQIRVGLLPLWFALGKRNSFYFRQLAEESLDSIFRLLNIVPMGSLGTFKYSDLDHLRIRLTEYSKKVNLSGCPQIPSTILCLSLIPQSYLTDPMQEKIIEKLFFNCKHPVRDRWVFPQNLSEETLTFEAVQEVDISKCRNLHVEHAVDCFRKSFPSLRTLKAGYLLNIGTTSFLQLLEKCPLVCEIDMTVDITPLIPASVTVLSSSPAEVQPVPEKTSSAKYQAVQIMSFNEFGPPLSNVTKLTLDGRTDVSDLGLHYISKLCVSLCHLNIKGCISVTDIGISDLISTCKKLNSIVVCDTSFGINAVQALCSAISDSGNTSLHSRDKRLNSVVSNFETLHMGGCQGVSKSSLIELMSQTQVLKSLCLRGTDLVDQALYNFVGSSLEMLDISNTKISGAALTHVIQGNPSLKCLKARDCRNLFPGDSCTEKRESDLPSLHEKLHAELGKMNRLEEIEFGWGFSFISFSSLESALMSLKAINIGLGGMLGEDALKRLPAICPLLETIILHFQFHHYCLLQAFHQTSPGFHLELVSSVIAKMLSF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02500 786 PANTHER UNCHARACTERIZED 276 700 - -
Viun1g02500 786 Gene3D Ribonuclease Inhibitor 566 771 IPR032675 -
Viun1g02500 786 Pfam BTB And C-terminal Kelch 155 256 IPR011705 -
Viun1g02500 786 Gene3D - 175 277 - -
Viun1g02500 786 SUPERFAMILY POZ domain 50 136 IPR011333 -
Viun1g02500 786 Gene3D Potassium Channel Kv1.1; Chain A 45 162 IPR011333 -
Viun1g02500 786 CDD BTB_POZ_ZBTB_KLHL-like 51 122 - -
Viun1g02500 786 SMART LRR_CC_2 626 650 IPR006553 -
Viun1g02500 786 SMART LRR_CC_2 577 602 IPR006553 -
Viun1g02500 786 SMART LRR_CC_2 507 532 IPR006553 -
Viun1g02500 786 SUPERFAMILY RNI-like 373 767 - -
Viun1g02500 786 Gene3D Ribonuclease Inhibitor 453 565 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02500 Viun-Chr1 35388161 35396496 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02500 - - gmx:100791594 1186.4