Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02493 ATGCAGAGTGAGCAACAGAGCAACAACAACAACCAGTTGGTAGTGCAGAATTCGGGGAGCTTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATGTCAAGGTCTGCTCTTTCCACTTTCAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAGCTTCAGTTGGGTCGTGTTGAGGAAGAAACCAAACGTCTTGCCACCATTCGTGAGGAGCTTGAAGCCCTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTCGAAAAAAGATCGATTCCGTAAACAAAGAATTAAAGCCGCTGGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTCGAAGCTTTTAATGACAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGCAAGAACGTAGATTCGATGCAATGA 504 0.4544 MQSEQQSNNNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKKIDSVNKELKPLGHACQKKEKEYKDALEAFNDKNREKVQLITKLMELVSESERLRMKKLEELSKNVDSMQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02493 167 Coils Coil 113 133 - -
Viun1g02493 167 Coils Coil 39 59 - -
Viun1g02493 167 Pfam Transcriptional activator 16 165 IPR007033 -
Viun1g02493 167 MobiDBLite consensus disorder prediction 1 45 - -
Viun1g02493 167 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 165 IPR007033 -
Viun1g02493 167 MobiDBLite consensus disorder prediction 1 25 - -
Viun1g02493 167 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02493 Viun-Chr1 35285059 35287026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02493 - - gmx:100499923 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02493 1 35285059 35287026 Viun7g02795 7 31291136 31293330 ECH
Viun1g02493 1 35285059 35287026 Viun1g02493 1 35285059 35287026 ECH
Viun1g02493 1 35285059 35287026 Viun11g01775 11 33737758 33740645 ECH