Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02462 ATGCATTCCAGTCACTTACTTCTCGAGGAACCCATTCGTATGCTTTCCATTCTTGAACCATCTAAGGCCAGTTTTTTTCCTGCAATGACGAAGATTGTTGGTACGCTCGGGCCGAAATCTCGATCGGTCGAGGTTATTTCTGCTTGCCTTAAAGCTGGAATGTCAGTGGCTCGTTTCGACTTCTCTTGGGGCGGTCCTGAATATCACCAGGAGACTTTGGAGAATTTGAAAACCGCTATCAAATCTACTAAGAAACTCTGTGCTGTAATGCTAGACACGGTGGGAGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAATCTATCTCGCTCCAGGCTGATGCTCAGGTTGTTCTGACTCCTGACCGGGGACAAGAAGCATCTTCAGAGATACTGCCTATCAATTTTGATGAGCTGGCAAAGTCGATTAAGAAGGGCGACACAATTTTTGTTGGTCAATACTTGTTCACGGGAAGTGAAACTACTTCTGTATGGCTAGAGGTGTCCGAAGTTACAGGTCAGGACGTTGTTTGTACTATAAAGAATTCAGCAACGTTAGCAGGGTCATTGTTCACTTTGCATGTCTCTCAGGTTCATATTGATTTGCCTACCCTCACTGATAAAGACAAGGAGGTTATAAGCACCTGGGGCGTAAAAAACAAAATTGATTTTCTATCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCCCGTGAATTCCTTTCTAAGTTAGGAGATCTAAGCCAGACTCATATATTTGCAAAGATTGAAAATGTTGAGGGATTGACCCACTTTGATGAAATTCTACAAGAAGCAGATGGTATTATTCTTTCCCGTGGGAATTTGGGCATTGATCTTCCCCCAGAGAAGGTATTTTTCTTTCAAAAATCAGCCCTTTACAAGTGTAATATGGCTGGCAAACCTGCTGTGCTTACTCGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGTGCAGAAGCCACTGACGTTGCCAATGCTGTTTTAGATGGGAGTGATGCAATACTTCTAGGTGCTGAGACTTTACGTGGGTTATACCCTGTTGAGACTATTTCTACAGTTGGCAGAATTTGTGCAGAAGCAGAGAAAGTTTTTAATCAAGACCTTTATTTTAAGAAAACTGTCAAATATGTTGGAGAACCCATGTCCCACTTGGAATCTATTGCCTCCTCTGCGGTACGGGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGCTTCACTTCATCTGGAAGGGCCGCAAGATTGATAGCAAAATATAGGCCGACCATGCCAGTTCTCTCTGTTGTGATCCCCCGAATCACGACAAATCAACTGAAATGGAGCTTTAGCGGAGCTTTTGAGGACGAACTGCCAACTCATTTGAGGGAAAGCCTATTTACAGCTAGGCAATCACTTATCGTAAGAGGGCTCTTTCCCATACTTGCCGATCCTCGACATCCTGCCGAGTCAACTAGTGCTTCAAACGAATCTATTCTAAAGGTTGCCCTTGATCATGGAAAAGCAGCAGGAGTTATAAAGTCGCACGATCGTGTAGTTATTTGCCAGAAAGTTGGTGATTCATCTGTGGTTAAGATAATCGAGCTTGAAGATTAA 1623 0.4325 MHSSHLLLEEPIRMLSILEPSKASFFPAMTKIVGTLGPKSRSVEVISACLKAGMSVARFDFSWGGPEYHQETLENLKTAIKSTKKLCAVMLDTVGAEMQVVNKSEKSISLQADAQVVLTPDRGQEASSEILPINFDELAKSIKKGDTIFVGQYLFTGSETTSVWLEVSEVTGQDVVCTIKNSATLAGSLFTLHVSQVHIDLPTLTDKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTHIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICAEAEKVFNQDLYFKKTVKYVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRITTNQLKWSFSGAFEDELPTHLRESLFTARQSLIVRGLFPILADPRHPAESTSASNESILKVALDHGKAAGVIKSHDRVVICQKVGDSSVVKIIELED 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02462 540 Gene3D - 30 362 IPR040442 -
Viun1g02462 540 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Viun1g02462 540 FunFam Pyruvate kinase 96 202 - -
Viun1g02462 540 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 NCBIfam pyruvate kinase 30 449 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 SUPERFAMILY PK C-terminal domain-like 468 535 IPR036918 -
Viun1g02462 540 FunFam Pyruvate kinase 371 526 - -
Viun1g02462 540 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Viun1g02462 540 PANTHER PYRUVATE KINASE 27 525 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun1g02462 540 Gene3D - 363 538 IPR036918 -
Viun1g02462 540 SUPERFAMILY PK C-terminal domain-like 358 449 IPR036918 -
Viun1g02462 540 Pfam Pyruvate kinase, alpha/beta domain 395 532 IPR015795 -
Viun1g02462 540 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02462 Viun-Chr1 34979430 34987472 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02462 K00873 - gmx:100781158 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02462 1 34979430 34987472 Viun1g02462 1 34979430 34987472 ECH