Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02460 ATGGGGGCCTCGCTGTCGAACCTAGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAATTGCGTCGCCCGCGTTTTCCTCCACCTCACTCCGCCGGAGATATGCAACCTAGCGCGCCTCAACCGCTCTTTTCGCGGCGCTGCCTCCGCCGATTCCGTCTGGCGAACGAAGCTGCCTACCAACTACCAAGATCTGCTCGATTTGATGCCTCCCGAGAGGTACCGGAATCTCTCCAGGAAGGACATCTTCGCGCTGCTCTCTCGGCCAGTGCCGTTCGACGACGGCAACAAGGAAGTGTGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGTAGATACTGGACTTGGGTTCGTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAAGTCAGCTTCCCATTTCCTGCTGATATTTATACTGTATCCTTTAGGCTTCACCTTGGACGATTTTCAAAGAGGCTTGGGCGACGCGTGCGCAACTATGAACACACCCATGGTTGGGACATAAAACCAGTGAAATTTGAGTTGTCAACCATGGATGGTCAGCAAGCATCATTCGAGTGCTGTCTGGATGAAGCTGAGCCTGACGATGCACACGGCAATCAAAAGTGCGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGGGGATCAGAACCTACAACCAAAGTAAGATTCTCCATGAAACAGATTGACTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTCATTTGAGAGAGCGCACCAGAAGCGGAATTCTGAAATAA 888 0.5113 MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRSFRGAASADSVWRTKLPTNYQDLLDLMPPERYRNLSRKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVRTEESRFNTVAYLQQIWWFEVDGEVSFPFPADIYTVSFRLHLGRFSKRLGRRVRNYEHTHGWDIKPVKFELSTMDGQQASFECCLDEAEPDDAHGNQKCGHWVDYKVGEFIVRGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSHLRERTRSGILK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02460 295 SUPERFAMILY F-box domain 15 79 IPR036047 GO:0005515
Viun1g02460 295 PANTHER F-BOX PROTEIN PP2-A15 6 289 - -
Viun1g02460 295 CDD F-box_AtSKIP3-like 19 64 - -
Viun1g02460 295 SMART fbox_2 22 62 IPR001810 GO:0005515
Viun1g02460 295 Pfam Phloem protein 2 113 282 IPR025886 -
Viun1g02460 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Viun1g02460 295 Gene3D - 19 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02460 Viun-Chr1 34967198 34971582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02460 - - gmx:100807328 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02460 1 34967198 34971582 Viun1g02460 1 34967198 34971582 ECH