Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02452 ATGGAAAACTCAACATCAAAGCATGAGGTCCTGAAGCCAGTGATCCTAAAAGCTGGTGTTCCTTTGGCCGTGTCTTTTGCTGGTTTTGTATATGCTTGGTTCGTGGCAAAGAAAAGCCTCTCTAAAACCTCTTCTTTATCACCAAATGGAGCAGGTTCCCATGAAAACAATTCCCACCACGACCCTTCATATGAAGAAAGTTGTTGTCATAGTGATAGCCTCTCTTGTATGGAAGATGAAGGAAATAGCACAACTTTGGATGAAAGTGTCGTTGCTGAAAGTTCTCTGATCCCTGACATGCCATGTTTAGAAGAGGAGATTAATGGCTTAAGAAGCAGGATTGAGGGTATGCAAATGAAAGAGTTGGCCTTGCGTTTTCAGTTTGATCGTTATTGTTGGTTGAAGGAGCAAGAAACTGTGGTTGGGGAGATCAAAACCATGTTGTCGCTTGAGACTGCACGTGTTGACTTCTTGGATAGGGAGATTTCATCGATGGAGACACAGAATAAGAGGTTGGAGAGTTTTGTTGCTCAATATCTCAGAGTTGTAGAACAGATAGAGCGTTGGAAATCTGAGAATAGAATGCTTCGGAGGAAGTTTCAGAAGCTGATGAGGAAATCAAAGGCACAAACCCGCGTGGCCAAGGAGCAGGCTTTGAAGATCAAAATGGACGAAGAAGAAATATTGAGAAGCCGTGATGCCTTGGAAACAAAAGTTGATGTCATTGGTAAACTAGAGGATAAAATGGAAGAGCTGCAGAGGGATTTGGATCAATTGCATGATGAAAAGAATGAACTTCTGAAGAAGCTTGATACAGCAGAAAAATCACATGCTTCAGAGATTGAAGCTGGAGATGTAAGTAGGGAAGAGTACAAACAGGTTGTGGATGAACTGGAGCAGATGAAGAAGGACCGAGCAGATGAAGCTAAAGAGCTGATTTACTTGCGGTGGACCAATGCCTGTTTAAGGCATGATCTAATGAGGCCTCATGAACAACAACATGATCAAGATAAAAGCCATTCAGAATTGGAATTCGAAAGAAATGATGTAGTTATCCATTATGACTCAGAGCATGAACTACACAATTCTGTTTTGGAGCATCACAGTGATCCTTCCTTTGATGAGCATCATAACAGTGACAGTGGTTGTTCAAAAAGGAAAAAGTTGGTTGAAAGGCTGAAGAGATGGGTGGAAGGAAGTGAAAAAGGTAGAATTAGACATTCTGTTTCGAAAGGGACAGATGAAAATGTAGTTCCTAGAAGGAAATCGTGTTCTAGTGCTTGA 1284 0.4151 MENSTSKHEVLKPVILKAGVPLAVSFAGFVYAWFVAKKSLSKTSSLSPNGAGSHENNSHHDPSYEESCCHSDSLSCMEDEGNSTTLDESVVAESSLIPDMPCLEEEINGLRSRIEGMQMKELALRFQFDRYCWLKEQETVVGEIKTMLSLETARVDFLDREISSMETQNKRLESFVAQYLRVVEQIERWKSENRMLRRKFQKLMRKSKAQTRVAKEQALKIKMDEEEILRSRDALETKVDVIGKLEDKMEELQRDLDQLHDEKNELLKKLDTAEKSHASEIEAGDVSREEYKQVVDELEQMKKDRADEAKELIYLRWTNACLRHDLMRPHEQQHDQDKSHSELEFERNDVVIHYDSEHELHNSVLEHHSDPSFDEHHNSDSGCSKRKKLVERLKRWVEGSEKGRIRHSVSKGTDENVVPRRKSCSSA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02452 427 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 12 370 IPR040265 -
Viun1g02452 427 MobiDBLite consensus disorder prediction 401 427 - -
Viun1g02452 427 MobiDBLite consensus disorder prediction 45 66 - -
Viun1g02452 427 MobiDBLite consensus disorder prediction 367 386 - -
Viun1g02452 427 Coils Coil 186 206 - -
Viun1g02452 427 Coils Coil 288 311 - -
Viun1g02452 427 Coils Coil 235 276 - -
Viun1g02452 427 Coils Coil 100 120 - -
Viun1g02452 427 MobiDBLite consensus disorder prediction 401 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02452 Viun-Chr1 34908509 34910755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02452 - - gmx:100805210 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02452 1 34908509 34910755 Viun1g02452 1 34908509 34910755 ECH
Viun1g02452 1 34908509 34910755 Viun7g00840 7 7465659 7467221 PCT