Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02445 ATGTTCAGATTCTGGGGATCACAAGAGCAACAATCACAGGATGGTTCCTCGCAGTCACAGTCATGGTATCCACCATCAGTGGTAAGTTCACCAAGTTCGTCTAGGCCTGCTACACCGTCTGGATCTTCTTCTTCATTACCGCATAGGCCTTCTTCTCATGTTCCGCCCTCTGAAGCTGCTGGAGTCATCGCTGTTTTGAAGGACAAGAGTGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCATACCAGCAGTTCTTACATTCGCTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTGCAGCTTGCAGAGGAAAATCTTCAAAAGGAGCCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTAGGACAACTGAGTTAGCTGCCGCAAAAGAGAAACTAAATGAGCTTGAAAAGCAGAAAGAAGAAATGTTGAAACTGAATTCGCCAGCATCTCTTGTCCAGAGGATTCTAGAGTCTGCGAATAAGACTGAAGAGGAATCTGACGATCTACACCAGCATTTCCTTGACAGAGAGATTGATCTTGCGGCTTTCTTGCAAAAGTACAAGAAGCTACGTACCACTTACCACAAAAAGACTCTGATACATCTTGCTGCTAAAACATCAACTGTATGA 666 0.4279 MFRFWGSQEQQSQDGSSQSQSWYPPSVVSSPSSSRPATPSGSSSSLPHRPSSHVPPSEAAGVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPASLVQRILESANKTEEESDDLHQHFLDREIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSTV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02445 221 MobiDBLite consensus disorder prediction 1 58 - -
Viun1g02445 221 SUPERFAMILY Endosomal sorting complex assembly domain 159 209 IPR037202 -
Viun1g02445 221 Coils Coil 130 157 - -
Viun1g02445 221 Gene3D Helix hairpin bin 145 214 IPR029012 -
Viun1g02445 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 211 IPR009851 -
Viun1g02445 221 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 15 219 - -
Viun1g02445 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Viun1g02445 221 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02445 Viun-Chr1 34864478 34869708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02445 K12185 - gmx:100305851 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02445 1 34864478 34869708 Viun1g02445 1 34864478 34869708 ECH