Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02405 ATGGATGAAGGAACTAAGAAAATGGAAGAAGGCCTGAATTCACCACTGAATGAAGATGGTAATAAGAATGATTTGAAGAAGCAGGTAACCATTAAAACCGGTAACGGAGGTTCTACTGTTGAGCATCACAGAGACACAATGGCTAAGCCTGTGGCTGTGGATGAGGCGGCGGAGCCACCGGTGGTTAAGAAGAATACCAAAAGGGTTGCAACCCTCGATGCATTTAGGGGTCTCACCATAGTGTTGATGATCCTGGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCACTCCCCATGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTCAAGAGAATCCCCAAGAAAAGGGATGCTGTAAAGAAGATAATTCTTAGGACGATGAAACTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCTCCTAATGACCTTGTATACGGAGTTAACATGAAATTTATCCGATGGTGTGGCATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGTAGCTCTAATAGAGACATTTACCACCAAACTCAGACCCACAACACTGGGTTCTGGACACCTATCCATTTTTACTGCTTATAAATGGCTTGGAGGTTTTGTGGCATTTCTCATTTATATGATCACAACCTTCACTCTCTACGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGGCGATGAACCGAAGAGATACACGGTCATTTGTGGGATGAGAGGACACCTAGGACCAGCATGTAACGCTGTCGGACACGTGGACCGACAGGTTTGGGGGGTCAACCATCTTTATTCTCAACCCGTGTGGAGACGCTTAAAGGCGTGCACCCTCAATTCTCCTGGAGATGGTCTTTTCAGTGAGGATGCTCCAAGTTGGTGTCGTGCTCCTTTTGAACCTGAAGGCTTGTTGAGTTCTATATCAGCTATCATCTCTGGCACTTTAGGGATCCACTATGGGCACGTCTTGATTCACTTTAAGGGTCACTTGGAGAGGCTGAAACACTGGGTCTCAATGGGGTTTGTGTTACTCATCATAGCCATCATCCTTCACTTCACAGATGCTATCCCAATTAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCTGCTGGAATTGTTTTCTCTGGGTTCTACATACTGATTGATGTTTTGGGGCTGCGAACTCCATTTTTGTTCTTGGAATGGATAGGAATGAATGCTATGCTAGTATTTGTGATGGCAGCTCAGGGCATTTTTGCAGCTTTTGTAAATGGATGGTATTATGAAGATCCACGTAACTCTCTGGTACACTGGATCAAGAAACATGTGTTTGACAATGTTTGGCACTCGGAGAGAGTGGGAACCATAATGTATGTGATATTTGCAGAAATCACATTCTGGAGCGTGGTTGCTGGCGTCTTACACAAATTAGGAATATATTGGAAACTATAA 1503 0.4424 MDEGTKKMEEGLNSPLNEDGNKNDLKKQVTIKTGNGGSTVEHHRDTMAKPVAVDEAAEPPVVKKNTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKKRDAVKKIILRTMKLLFWGIILQGGYSHAPNDLVYGVNMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLGSGHLSIFTAYKWLGGFVAFLIYMITTFTLYVPDWSFVDRFNGDEPKRYTVICGMRGHLGPACNAVGHVDRQVWGVNHLYSQPVWRRLKACTLNSPGDGLFSEDAPSWCRAPFEPEGLLSSISAIISGTLGIHYGHVLIHFKGHLERLKHWVSMGFVLLIIAIILHFTDAIPINKQLYSFSYVCFTAGAAGIVFSGFYILIDVLGLRTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWYYEDPRNSLVHWIKKHVFDNVWHSERVGTIMYVIFAEITFWSVVAGVLHKLGIYWKL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02405 500 PANTHER LD22376P 52 485 - -
Viun1g02405 500 MobiDBLite consensus disorder prediction 1 25 - -
Viun1g02405 500 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 68 198 IPR012429 -
Viun1g02405 500 Coils Coil 497 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02405 Viun-Chr1 34492609 34497762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02405 K10532 - gmx:100819967 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02405 1 34492609 34497762 Viun1g02405 1 34492609 34497762 ECH
Viun1g02405 1 34492609 34497762 Viun7g01771 7 22778683 22785118 PCT