LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g02363	ATGGACACCAAGGCCTTCTTCAACCTCCACATCCTCAATGCCTCCATCGCCAGGCGCGTCCTTCTACGCTCCATCCTCCTTGCCTGCGCAATCTCCATCGTCTCTCTCTACCGCGCGCAGTCGCTCTTCGATTTCGCTCCCATCGCTACCTACTTGGACTGCGTTTCCGGTTTCCACGGCGTCACTTTCCGCCCCGCGTCCCATTTGCTCCGAACCCGCTTCTGGGTCCCTGCCAATTGCGAGAAAGACGCCAACTTGACCCTCACCGTGGTCACCGAGCTCACCGGGAACCGGTTTCTCTACCCCGGAGCGAAGAGCCTCTGCGTCGGAGAAGGATCTTCGATGGCCGTCGCGGCAATGAAACAGTTAGGCTTCTCCGCCGTCAGCGCCGTCCAAACGCGCAGTTTCGAGCAGAAGGAGGTCCTGTACGAGGATTCTTCCTTCGATTTCGTGTTTTCCAGGGACCTCGACAAGGTATCTGTCCCTGCTCTGTTGGTTCTCGAGATTGAGCGTGTTCTTAAGCCTGGTGGGATTGGCGCCCTTATTGTAGGTAGCTCCGGTTCGCATCCCAATGATTTGATAAGGGCAGCCACCCCTGTTTCCTCTTTGTTAAGATCTTCCAATGTGGTGCATGTTGATTATGTCAATGAGCTTAACCTCGTTGTTTTCAAGAAAAGACATGACAATACTACTTCGTTTTACCAACATAGTTTACCCGCTGATTGTCCCAGTCTCACCTTCACCCAACCCCTCATAGAGTTAATGGAGCCTCTTGTGAGTGAGAAGCAGAAAGCAGCACCTCCTGAGTTTCACAAGAACATTCCCTATTTGCCTAAGTTTGTGGATGTTTCCAGTAGGAAGAGGTTGGTGTATATTGATATTGGTGTGGGGGAGCTGCATAATGCCAATGTCAGTGATTGGTTCCTGCCATCATACCCTATTGATCAGAAAGATTTCAATGTTTACTTTGTTCACTACAACACTTCCATCATGTTGTCCTATGTGAAGCGACCTGGTATTACCTTTGTTTATCACCCTGGCTTGGCTGGTATTGGGAAGGTCACAGCTAAACTTGGAACTGATGATAATGATGATGATGACCTTGATTCTTTCCTTGGCGAGGAGGAGTTTGATTTCCTTGCCTGGTTCAGAGAAACTGTGCAATATGCTGATTTTGTAGTCCTCAAGATGAATGCAGGGAATGTTGAACTCAAGTTCCTCTCGGATATATTTGAGAATGGAGCTATATGCTTTGTTGATGAGTTGTTTCTCAAGTGTCCCGAGAGGGGAGGTGGTGATAAAAGTGTAACCACCATGGAAAGTTGTATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTATGTCCATCAATGGTGGGGAGACTAA	1389	0.4881	MDTKAFFNLHILNASIARRVLLRSILLACAISIVSLYRAQSLFDFAPIATYLDCVSGFHGVTFRPASHLLRTRFWVPANCEKDANLTLTVVTELTGNRFLYPGAKSLCVGEGSSMAVAAMKQLGFSAVSAVQTRSFEQKEVLYEDSSFDFVFSRDLDKVSVPALLVLEIERVLKPGGIGALIVGSSGSHPNDLIRAATPVSSLLRSSNVVHVDYVNELNLVVFKKRHDNTTSFYQHSLPADCPSLTFTQPLIELMEPLVSEKQKAAPPEFHKNIPYLPKFVDVSSRKRLVYIDIGVGELHNANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIGKVTAKLGTDDNDDDDLDSFLGEEEFDFLAWFRETVQYADFVVLKMNAGNVELKFLSDIFENGAICFVDELFLKCPERGGGDKSVTTMESCMDIYKGLRSNGVYVHQWWGD	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g02363	462	PANTHER	PEPTIDE UPSTREAM PROTEIN	1	462	-	-
	Viun1g02363	462	Pfam	Methyltransferase domain	133	178	IPR013216	GO:0008168
	Viun1g02363	462	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	116	190	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g02363	Viun-Chr1	34088998	34090979	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g02363	-		-	gmx:100806816	738.799

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun1g02363	1	34088998	34090979	Viun7g00904	7	8472517	8474533	PCT