Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02361 ATGGCAAAGCTTTTCCATTTCCTCCTTCTTCTCTTCATTCAAACAATTTCAGCCCAAGTAGCACCAGCAGCACCAGCAGGACCCACCAACATCACCCAGGTGCTAGAAAAAGCAGGGCAATTCACAACCTTCATGAAACTCCTCAAAGCCACACAAACAGCTGACAGACTCAACTCACAGCTCAACAACTCAAACCAAGGCATAACAGTGTTTGCACCCACCGACAACGCATTCTCAAGCCTAAAAGCAGGAACACTAAACTCCATAAACTCGCAAGACCAGATGCAGCTGGTGCAGTTCCACATCCTCCCCACTCTCTACTCCATCTCACAGTTCCAAACCGCAAGTAACCCTTTACACACACAAGCTGGGAACAGCGACGACGGAGAATACCCTCTGAACGTCACCACCTCCGGGAACCAAGTGAATCTAACAACCGGGGTGGTTGATACAACAGTTTCCAACACTATATTCAGCGATAACCAGCTCGCGGTGTATCAGGTCGATAAGGTGCTTCTTCCTATGGCACTTTTTGGCTCCACGGCTCCGGCGGCAGCACCGGCGGAGGCTCCGGCGCCGTCCAAGCCGGAGAAGAATGTCCGAGCAGGGGCCGCTGATTCTCCGGCAGGGTCTTCCGACTCGTCCGCTGATGCTTCCAGTGCAGTGAGTTTGAAAAGGAAAACAGTTGAAGTTGTTACCTTTGTTGTTGCAGTTATTGCCGTTTCTTGTTTCTGA 735 0.5088 MAKLFHFLLLLFIQTISAQVAPAAPAGPTNITQVLEKAGQFTTFMKLLKATQTADRLNSQLNNSNQGITVFAPTDNAFSSLKAGTLNSINSQDQMQLVQFHILPTLYSISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNLTTGVVDTTVSNTIFSDNQLAVYQVDKVLLPMALFGSTAPAAAPAEAPAPSKPEKNVRAGAADSPAGSSDSSADASSAVSLKRKTVEVVTFVVAVIAVSCF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02361 244 MobiDBLite consensus disorder prediction 185 218 - -
Viun1g02361 244 Gene3D FAS1 domain 13 175 IPR036378 -
Viun1g02361 244 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 236 IPR045003 -
Viun1g02361 244 ProSiteProfiles FAS1/BIgH3 domain profile. 28 172 IPR000782 -
Viun1g02361 244 FunFam Fasciclin-like arabinogalactan protein 11 11 174 - -
Viun1g02361 244 SMART fasc_3 69 175 IPR000782 -
Viun1g02361 244 Pfam Fasciclin domain 40 174 IPR000782 -
Viun1g02361 244 SUPERFAMILY FAS1 domain 22 174 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02361 Viun-Chr1 34069763 34070762 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02361 - - pvu:PHAVU_001G176400g 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02361 1 34069763 34070762 Viun1g02361 1 34069763 34070762 ECH