Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02342 ATGACTTCTTCTCGACTCGTTTTTTGCCATTTGTGTGGGACAATGCTAATTGTTCCTTCCCGTGAGTACGCTCAATGCCCTTTGTGCAAAACTCTCCGAGATATAGAAGATATTCGTGATAAGGAAATAAGTTACACAATTGATGCTGAGGAGATCAGAAGAGAGCTTGGAATGGAAATAATTGAGGAACAAAAGGTGCAATTGTCTAAGGTTAATAAGAAATGTGAAAAATGTGGTCATGATGAAGCTAACTTTTATACGAGACAGATGAGATCAGCAGATGAAGGACAAACTACTTTTTATACATGTACCCGTTGTGGTCATCAATCTCAGGAGAATTAG 342 0.383 MTSSRLDXFCHLCGTMLIVPSREYAQCPLCKTLRDIEDIRDKEISYTIDAEEIRRELGMEIIEEQKVQLSKVNKKCEKCGHDEANFYTRQMRSADEGQTTFYTCTRCGHQSQEN 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02342 114 PANTHER DNA-DIRECTED RNA POLYMERASE 9 113 IPR012164 GO:0003899|GO:0006351
Viun1g02342 114 CDD Zn-ribbon_RPA12 71 114 IPR034004 GO:0006379
Viun1g02342 114 FunFam DNA-directed RNA polymerase subunit 49 113 - -
Viun1g02342 114 Pfam Transcription factor S-II (TFIIS) 75 110 IPR001222 GO:0003676|GO:0006351|GO:0008270
Viun1g02342 114 PIRSF RNApol_RpoM 8 114 IPR012164 GO:0003899|GO:0006351
Viun1g02342 114 ProSiteProfiles Zinc finger TFIIS-type profile. 72 112 IPR001222 GO:0003676|GO:0006351|GO:0008270
Viun1g02342 114 SMART Cys4_2 74 113 IPR001222 GO:0003676|GO:0006351|GO:0008270
Viun1g02342 114 Gene3D - 60 113 - -
Viun1g02342 114 SUPERFAMILY Zinc beta-ribbon 62 113 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02342 K03000 - gmx:100527489 187.963