Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02279 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATGAACCCTCTTCTTCCATTTCCAACACTGCTCAATTTGGTGGCAGAGCCATTGATCGCCACAACCCCATCATCACAGATCCAAGAAGAACACCTTCCAGAGACTTCATTGTCCCCAGTTCTTCTCCTAAGCCCCACATCGACTCCAAACCTCTGCATGATCATCTCCCCAAGCCTAAGAAAAACTCCACTTCCAAGCCAAGTGGCCAGAAAAAGAAACATGCAACAAAGGGTCTTGATCAAAAGAAGAAAAGTAGTGTGGAAAAATTGACTGAACACATCACAAACAATTACTCTTCAAAACCCATTGATAGTGTTCTGAGAAGGAGTTGGGCTAGGCCACCTACTGATTTGATCACCCCTCCTGGTTCCTCAAGATATTTGCTCAGTGACATGCCTTCCTTCCATGGTGGATCATCACTTTATGATCCTGTTCTGGCTTTAACTAACGTTGACAAGGAGAAAGCTCAAGTCCTTCATCATGATAAACCCTCTTCTAGCTCCTCTCTTCCAAAATCTGCTTCCTCAGACCAGGTTGTAGTTTTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGAAAACATCTCTCCAGAATGCGAGGAGTAACATCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTGGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACCTGTTTCAGTAGTTGGATCCGGTTATGCAGAAACAAAAAAAACAAATTTTATCTAA 846 0.4374 MKGIDIFCASQASTAICLSMDEPSSSISNTAQFGGRAIDRHNPIITDPRRTPSRDFIVPSSSPKPHIDSKPLHDHLPKPKKNSTSKPSGQKKKHATKGLDQKKKSSVEKLTEHITNNYSSKPIDSVLRRSWARPPTDLITPPGSSRYLLSDMPSFHGGSSLYDPVLALTNVDKEKAQVLHHDKPSSSSSLPKSASSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEPVSVVGSGYAETKKTNFI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02279 281 CDD HMA 201 254 IPR006121 GO:0046872
Viun1g02279 281 ProSiteProfiles Heavy-metal-associated domain profile. 197 263 IPR006121 GO:0046872
Viun1g02279 281 SUPERFAMILY HMA, heavy metal-associated domain 198 255 IPR036163 GO:0046872
Viun1g02279 281 Pfam Heavy-metal-associated domain 202 254 IPR006121 GO:0046872
Viun1g02279 281 MobiDBLite consensus disorder prediction 67 81 - -
Viun1g02279 281 MobiDBLite consensus disorder prediction 23 107 - -
Viun1g02279 281 MobiDBLite consensus disorder prediction 85 99 - -
Viun1g02279 281 Gene3D - 195 259 - -
Viun1g02279 281 PANTHER OS08G0405700 PROTEIN 6 266 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02279 Viun-Chr1 33646562 33648602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02279 - - gmx:100810015 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02279 1 33646562 33648602 Viun7g01120 7 12224572 12225928 PCT