Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02268 ATGAGGAAAGAGTCGAAGAAGTTATCCAAGTCTTGGCCCAAATTAGCCGTGAGGAAGTGGCTCAATACGAAGAACAGTGCTGAGAAGTTTCAGTCAGACTACGATGCAACAGCAACTGGAATGGAAAGAAGAAAGAGTTGCTCTGACGAAGATCGTTACGTCACCGTACTGGATGATGATTTCTCAGAGGGGAAGAGTGGGATGAAAGGTTTGGTGCTTGGGAAGCAATCAAGTCCTGGGAGTGGCACTGGGGCTATGAATCTTAGGATGTTCGTGGGAACGTGGAATGTGGGAGGGAAATCACCCAAGGAAGGTTTGAGTTTGAGGAATTGGCTCACGTCTCCTTCCGAGCCTCACATCTATGTTATTGGGTTCCAAGAAATCGTACCGCTAAATGCGGGCAACGTGCTTGGGCCGGAGGACAGTGGCCCAGCAGCGAAGTGGGTGGGCCTTATCCATGAAGCCTTGAACATCAACAACTACGACGACGATGAGAACAACCGTGACGACGACCATAAGGAAAAGTTTCCTAAGACTCCACGACGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATTTTCTTGTGCGTGTGGGTTCGAGCGGATCTTTGCAACCATGTTTCCAATTTGAAAGTGTCCTGTGTTGGCAGAGGCATCATGGGTTATCTTGGAAATAAGGGTTCAACATCGATTAGCATGACATTGTACAACACCACGTTCTGCTTCGTTTGCACCCACTTGGCTTCTGGGGAGAAATTTGGTGACGAATTGCGAAGAAACTTGGACGTCTCGGAAATCTTGAAGAAAACCAAATTTTCTCACTCCTTTAAATCTCCTCCTCATTCTCTGTCTCCTGAGAGTATTCTGGAACACGATAATATTATTTGGCTCGGCGACTTGAATTATCGACTAGCTGCTGGCTATGAGGATACACATGAACTACTAAAGAAGAATAATTGGCAGGCATTACTAGAGAAGGATCAGCTAAGGATAGAGCAGAGGGCTGGTCGAGTATTCAAAGGTTGGAATGAAGGGGACATATACTTTGCTCCTACTTACAAATACTTGACCAATTCTGATCACTATGTCGCACAATCCTCCAAATCCAGGGAAAAACGACGAACTCCTGCTTGGTGCGATCGAATTCTTTGGAAAGGAGAAAGGCTGAATCAGATGTGGTATGTTCGGGGAGAGTCCAAGTTCTCAGATCACAGGCCAGTTTATTCACTATTCTCTGTTGAAGTGGACTTGACGAGCAAGAATCGAGTTCCCAGGTCCTGTACATTAAAACCCTTGACAAGTACTGCGTTGTCATCAACTTCTTGTGCTGCTAAAGTCCAAGCAGAAGAACAACTCTTCCTGCTAACGAGAGCTCAAAGTTGCATCGACACAGTTCCCAGGTTTTAA 1410 0.4596 MRKESKKLSKSWPKLAVRKWLNTKNSAEKFQSDYDATATGMERRKSCSDEDRYVTVLDDDFSEGKSGMKGLVLGKQSSPGSGTGAMNLRMFVGTWNVGGKSPKEGLSLRNWLTSPSEPHIYVIGFQEIVPLNAGNVLGPEDSGPAAKWVGLIHEALNINNYDDDENNRDDDHKEKFPKTPRRYCLAASKQMVGIFLCVWVRADLCNHVSNLKVSCVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFSHSFKSPPHSLSPESILEHDNIIWLGDLNYRLAAGYEDTHELLKKNNWQALLEKDQLRIEQRAGRVFKGWNEGDIYFAPTYKYLTNSDHYVAQSSKSREKRRTPAWCDRILWKGERLNQMWYVRGESKFSDHRPVYSLFSVEVDLTSKNRVPRSCTLKPLTSTALSSTSCAAKVQAEEQLFLLTRAQSCIDTVPRF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02268 469 Gene3D Endonuclease/exonuclease/phosphatase 77 436 IPR036691 -
Viun1g02268 469 Pfam Endonuclease/Exonuclease/phosphatase family 93 405 IPR005135 GO:0003824
Viun1g02268 469 SUPERFAMILY DNase I-like 86 420 IPR036691 -
Viun1g02268 469 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 430 IPR045849 GO:0004445
Viun1g02268 469 SMART i5p_5 86 420 IPR000300 GO:0016791|GO:0046856
Viun1g02268 469 FunFam Type I inositol polyphosphate 5-phosphatase 8 73 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02268 Viun-Chr1 33547402 33552450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02268 87 428 Acyl Lipid Metabolism Gene Families AT2G43900 30.811 2.96e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02268 - - vun:114176714 934.48