Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02213 ATGGCGGAGGAGGCTCCGTCTCTGATTAGTCTCTGCATGGACGCTCTGACGCAACAACTTCTCCGACCATTCGATGATCTTCTTCTTCCTTCCATCTACCATCTTCCTTCTCACTTACTCAACACCTTAATCACGCGCTTGCCCCCTTTCGCTCTCCGCATATTCCAACACCACCTGCCGTTCGACGAGGATGGTTTTTCGCTAGACCACTCAACCAACAAGAGGAAACGCGCGGGGGATTGGAATCTGAATTCAGCTTGGCAGAGGTTGTTTCGCCGGCGCTGGCCGCAGCGCGTTCAGCTGATTCCGCCAACGGATTGGCAGCAACTCTACTGGGAAATGCATTTGCAAGATTGTTTAGATGAAGCGGCGGAGGTAGCACTACTCCCATCGTTTAATGGGTATATCGGTGACATACAGATTTCAGACAGTACACTGAAACATGTTGGCTTTGTGGGGGATACAAGCCCTTCAACATGTGGCCATTCAAAATTGTCTTACCATTGCCGACAGTTTGGTAGCTATGTGAGTTGTCTGAGGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGCAAGAGTGTAAGCTGCAGAGTCTGCTACTAAGATGTATCAGATCCAAGGAACAAATTGATGGATTGTGCAAACTTCTTGCGCAACATTCTAGAACGTTAACATCTCTGGAATTTGTTCACTGCACATTCTCCACAGACTTTATTAATGCAATATTTGGTTCTTTAGTCATAGAGAGCGTACAAAAACATGGCATCCAACATTTGTCAATCATTTCGTCAAGTTTTCTGGAACCATGTGCAGTTTCTTTACCTAGGGGACTTGTGTCATTTTTGTCTTCAGGAAGGTCTTTATGCTCATTAAAATTATCTGGCAACCACCATGGACGGACTTTTGCCAAAGATCTTTTAGTGACGCTTTTCAATCTTTCCTCTAGCCTATCTGTCCTCGACCTTTCTGATAATAAAATAGCTGGATGGCTTTCTGACTTTAACAGGAGATTCCTGAGTGATTCACATCTGTGTTTTGGAAGTGGAAAGTCGTTGAAAATGTTGCGAGTACTCACTCTGAGGGAAAACAATTTAGGAAAAGATGATGCAGAAAGTCTTAGGTATGCTCTTGAACGTATGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAACGTGTCCTCCCATAAAGTGTTTGAAGTTAGAGAACTGTGACTTGTCCTGCGTTTCAGTGAATCATCTTCTACATGTCCTTTCTTCTTTCAAAGGGCCATTGAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAACCGAAGCATTGGGAAACTTTTTTAGTACCCCAATCGAAGTACTTGACATTGCAGGCATTGGCTTGGGCTCTCATGGTTTTCAAGAGCTTCAAAATCTAATAAAAGAGGAGCTTAAACTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGATACTGCCAAATTTTTGTCCAAACTTTTGTCACTGGCTCCACAACTAGTTGAAGTGAATGCAGCCAGTAATCTTATGCCAATAGAATCACTCGCCATAGTCTGCTCTGCATTAAAGTTTGCAAAAGGTAATGTTCAGCACGTGGACTTGACAGGACATATATGGGACTATAAGCCAGAGCACATTTCTCTATGCACTGAATTTGTACATAATGAATTACCTATATTGGTTCTTCCATCATCATCAACCTCTGCTGCACTTCACGACCATGATCCTTAA 1818 0.4257 MAEEAPSLISLCMDALTQQLLRPFDDLLLPSIYHLPSHLLNTLITRLPPFALRIFQHHLPFDEDGFSLDHSTNKRKRAGDWNLNSAWQRLFRRRWPQRVQLIPPTDWQQLYWEMHLQDCLDEAAEVALLPSFNGYIGDIQISDSTLKHVGFVGDTSPSTCGHSKLSYHCRQFGSYVSCLRLQNVLCTAETSVLLQECKLQSLLLRCIRSKEQIDGLCKLLAQHSRTLTSLEFVHCTFSTDFINAIFGSLVIESVQKHGIQHLSIISSSFLEPCAVSLPRGLVSFLSSGRSLCSLKLSGNHHGRTFAKDLLVTLFNLSSSLSVLDLSDNKIAGWLSDFNRRFLSDSHLCFGSGKSLKMLRVLTLRENNLGKDDAESLRYALERMPNLEELDISDNSIEDEGIRNLIPYFVGASETCPPIKCLKLENCDLSCVSVNHLLHVLSSFKGPLKSLSIADNYLGSQVTEALGNFFSTPIEVLDIAGIGLGSHGFQELQNLIKEELKLVKINISKNRGGIDTAKFLSKLLSLAPQLVEVNAASNLMPIESLAIVCSALKFAKGNVQHVDLTGHIWDYKPEHISLCTEFVHNELPILVLPSSSTSAALHDHDP 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02213 605 ProSiteProfiles Leucine-rich repeat profile. 385 405 IPR001611 GO:0005515
Viun1g02213 605 SUPERFAMILY RNI-like 177 570 - -
Viun1g02213 605 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 2 605 - -
Viun1g02213 605 Pfam Leucine Rich repeat 384 403 IPR001611 GO:0005515
Viun1g02213 605 Gene3D Ribonuclease Inhibitor 338 586 IPR032675 -
Viun1g02213 605 Gene3D Ribonuclease Inhibitor 179 337 IPR032675 -
Viun1g02213 605 SMART LRR_RI_2 415 442 - -
Viun1g02213 605 SMART LRR_RI_2 383 410 - -
Viun1g02213 605 SMART LRR_RI_2 355 382 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02213 - - gmx:100817679 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02213 1 33182833 33190403 Viun1g02213 1 33182833 33190403 ECH