Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02191 ATGGCTGATTTAGAAAATTTGCTCTTGGAGGCAGCGGGTAGAACCCGACACTCTCGTCCAACTTCAAGGAGAGGACATGGTGATGGTGAGAATGTCTCAAGTTCTGATGATGAACATGAATATCCAGGCTCAAATCACCCTGGCTCACAAGTTCCCCTAAAGAAGAGATTTGATCCAAAGGAAAGAGATGATGGCAAGGGAAGTAAGGAAGAAGGGGATGACCAATCTGATCACAAGGGTGATAGCAGCGATGAAGATGATTTTGGTGATGATCTTTATAAGAATGAAGATGACCGGCGTAAGCTTTCTGAGATGACTGAACTTCAGAGAGAGATGATATTATCAGATAGGGCAACCAAGAAGTATGATAAAGACTTATTGGGGAAGATATCATCAAAGAGGGAGAAGGGAAAGACAACTATACCTGGGACAAATACTTCACCTCCTCCACCATCTCGTGTGCGGTCATCAGTCAGATCAGTTGACCGGTCAATTGCCAAGAATGGTGCTTTAAGTGAATTGCGTGCGAAAAGATTAAAGCAGCAAGATTCAGAAGCAAACCGCAGAATAAGTGAGGCATCTAAAAGTCCAGGACCTGGACATGTTTCTCCAAAGCACAAACCTTTCTCTTCAACAAGTCTCACAAGCTCAAGTGACAGTGAAAGTGAAAATAGGTCCCAGAGTGATGATGGAGGGTTGAGTGATGATGACATTAACATTGACAGTGATGATGACAGGATAATTTTAGGACCTGAAGGGCTTACATTTGAGGATATAAAAGAAATTACTGTTAGCAGATCGAAACTGACAAAATGGTTTATGGAGCCCTTTTTTGAGGAGTTAATTGCTGGTTGTTTTGTAAGAGTTGGTATTGGTAGATCAAAGTCAGGACCTATCTACAGGCTCTGCGTGGTAAAAAATGTTGATGCCACAGATTGTGCTCGGCAGTATAAATTAGAAAATAAAATGACACACAAGTACTTAAATCTTGTATGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGACTATGGTTAGCGACTCTCTTCCACTTGAGGAGGAGTTCATCCAGTGGGTTAAGGAAGTGGAACGAAGAAGCGGTCGGATGCCAACAAAGCAAGAAGTGGAAATTAAAAAACAAGCTATACAAAATATCAACTCGTTTGTTTACTCAGCTGCTACGGTGAAGCAGATGTTACAAGAGAAAAAATCTGCCAAAATAAGACCACTGAATATTGCAGCTGAGAAGGGTAAGTTAAGAATGCAATTAGAAATAGCAGAGAGTAAGCAAAATAATACTGAAGTGAGTAGGATCATGACAAGGTTGCAAGAATTGGAGGAAGCTCGGCAGTCTAAGGAGAAGGATGCCAGAGCTCTGAGGCTTTCTGAGATGAATAAAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAATAAATAAAGATTTGAAAGCAGGGGAGGCAGGCTATGATCCATTTTCAAGGAGATGGACTAGATCAAGAAATTACTATGCCGCAAAGCCGGCTGAAGACGCTGCAGCTGAAAATAATAGTGCCATTGATATGGTGGGTGATGAAGGCAGCTCTCAGACGAGAACAGCTGTGACAGGGGTGGCTGGCATGGCTGCTACTGCTGCAGCAATAAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGATACAAGTGCTCCGGTGGATCAAGGAACAGTGACAAATGTGCTGCACGATTTTGAGCTGCCAATATCATTATCCATACTCCACAACTTTGGTGGAGCCCAAGGAGTTCAGGCAGGGTTTATGGCAAAAAAACAGAGAATAGAAGCAACTGTTGGACTTCAAGTTCCAGAAAAAGATGGTAGGAAGCATGCGAAGACATTAACAGTTAGTGATTACAAGAAAAGAATAGGGCTCTTTTGA 1926 0.4232 MADLENLLLEAAGRTRHSRPTSRRGHGDGENVSSSDDEHEYPGSNHPGSQVPLKKRFDPKERDDGKGSKEEGDDQSDHKGDSSDEDDFGDDLYKNEDDRRKLSEMTELQREMILSDRATKKYDKDLLGKISSKREKGKTTIPGTNTSPPPPSRVRSSVRSVDRSIAKNGALSELRAKRLKQQDSEANRRISEASKSPGPGHVSPKHKPFSSTSLTSSSDSESENRSQSDDGGLSDDDINIDSDDDRIILGPEGLTFEDIKEITVSRSKLTKWFMEPFFEELIAGCFVRVGIGRSKSGPIYRLCVVKNVDATDCARQYKLENKMTHKYLNLVWGNETSAARWQMTMVSDSLPLEEEFIQWVKEVERRSGRMPTKQEVEIKKQAIQNINSFVYSAATVKQMLQEKKSAKIRPLNIAAEKGKLRMQLEIAESKQNNTEVSRIMTRLQELEEARQSKEKDARALRLSEMNKKNRFENFKNASELKPINKDLKAGEAGYDPFSRRWTRSRNYYAAKPAEDAAAENNSAIDMVGDEGSSQTRTAVTGVAGMAATAAAIKAAAGAGKLVDTSAPVDQGTVTNVLHDFELPISLSILHNFGGAQGVQAGFMAKKQRIEATVGLQVPEKDGRKHAKTLTVSDYKKRIGLF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02191 641 SUPERFAMILY Plus3-like 255 386 IPR036128 GO:0003677
Viun1g02191 641 Gene3D - 254 385 IPR036128 GO:0003677
Viun1g02191 641 MobiDBLite consensus disorder prediction 206 222 - -
Viun1g02191 641 MobiDBLite consensus disorder prediction 1 244 - -
Viun1g02191 641 SMART rtf1 253 365 IPR004343 GO:0003677
Viun1g02191 641 PANTHER UNCHARACTERIZED 216 638 - -
Viun1g02191 641 MobiDBLite consensus disorder prediction 22 43 - -
Viun1g02191 641 MobiDBLite consensus disorder prediction 93 136 - -
Viun1g02191 641 MobiDBLite consensus disorder prediction 173 190 - -
Viun1g02191 641 MobiDBLite consensus disorder prediction 53 85 - -
Viun1g02191 641 Coils Coil 176 196 - -
Viun1g02191 641 Coils Coil 436 463 - -
Viun1g02191 641 ProSiteProfiles Plus3 domain profile. 253 388 IPR004343 GO:0003677
Viun1g02191 641 Pfam Plus-3 domain 258 363 IPR004343 GO:0003677
Viun1g02191 641 FunFam RNA polymerase-associated protein RTF1 254 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02191 Viun-Chr1 33019093 33022321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02191 K15178 - gmx:100817324 875.544