Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02189 ATGGAATCAAAAGGAGAAGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGAGGGTCCTGCAGCATTTTTCTGGGGGCGCATTCAGAGTTCCTGGAGAATCATTGCACAATATGTCACCAATGGGGCCTGGCGGGCATAGACGTTGTCAAAGTGAGCTTGGTAGCAGAGGAGCTGACCGTAATAACAACTTGCAGAAATTAAAATCTCACGTGAACAAGGCTTGGCGCTGGGGTGGCAAATCCCGCGAAGAAGAAGCCTTGGCGAATTTCAACCCTGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAGTCTGGATTGTGTAAATAATAAGGAGCCGACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCCTCCAGATGCTAATTTGGAAGCCGTGGAGCATTCATTTGCACGAAGGAAGAAGTGGGAAAAGGATAAGGGGAAACCTGAATTTCGAGATTGCAGAAAGTCTCAGCAACAAAGACTAACAGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTGACACTGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAATGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTCGTCTTTGCAGTCAAGGCAGCAGACAATACAACACTTTATGGAGTTTGTTTACATGTCCCTGAAATTGTACAAAGGCCCCCTGGTATCATGGGCATATCATCTTCTTTTTCTAATCCCTCCATGGGATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGCTATTGTCTTCTGACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACAGAGTTTATAAATGAGATGAGTCTCAGTGCCAGCGTTCCATCATCTCCCAAACTAGATGATCAAAGGAGGTCAAAGGAGGAAAAATCCCCAGAGAACGAGACATTTAGTGAATGGATGGATTCTGCAATTCCTCTTGATGGTGCAGCAGCTATTGCTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAACATTTATCACCTAAAATACAGGATAATCGCTGTCAATCTCCTGTAAGTGGGAGTGCCAGTGATGATGCTTCAGATTCTTCTCAGGTCAAGGATACAGATAAGGAGGACAAGAAGAATCCCCAAGTTCTAGATAACTGTGAGTTTAAGGCACCAGCAACTCTTTGTTCTATAAAAAGAATGCATGAAAATTGCAAAAATGACCAAGCTTCTCCGAAAGCCGGAACACCTTTGTCTGCTCGAAATCGTGTCTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCAGGCAATCAGAAGATGAGGACAATTTTTTCTCAAACACCGAAAGAGATTATGGGGATGAATTGTTAATTGAATGGGCTACGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCAGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGAGATGATTCTTCAAACTGTTCTGAAGCAGCTCTGGACAATACGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCGACTACATGTCGAGTTCTGTCCCTTGATAGTGTGTTGACATTGATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATACCCATGATTCGTCCTTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGACAATGATGGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCTGATGACTTGAATGCGAGAACTACTAATCGTGTTCTTGTTGATTTACAGAAGGACAAGGTGACAATGTGTTCATTACCAAGACTTCCACAGCATAGAGATCTTTACTCTCAGTTGAGTTCAATTCATGCTACACTTTCAAATCAAAGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCGGCAACTCAGTTTTTGAATATACTGTGGCACTATTTGGAGTCTCTTTGTGCAAATCTGAAATCCCACACGATAACTAATGTACAATCTAATAAAGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGATCAACCATTCATTAAGCTTTTTGTAGATACACAGCTATTCACTGTTTTATCAGACTCTCGTTTGACAAGCTTTGAAAGTGGAGAGTCATAG 2454 0.4291 MESKGEAEPQEERPSSPMRVLQHFSGGAFRVPGESLHNMSPMGPGGHRRCQSELGSRGADRNNNLQKLKSHVNKAWRWGGKSREEEALANFNPEVMANQKRQWYRLHPKSLDCVNNKEPTSLFEHFVIVGLPPDANLEAVEHSFARRKKWEKDKGKPEFRDCRKSQQQRLTEPTLEPQLLFKYPPAKKLTLRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFAVKAADNTTLYGVCLHVPEIVQRPPGIMGISSSFSNPSMGCSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITEFINEMSLSASVPSSPKLDDQRRSKEEKSPENETFSEWMDSAIPLDGAAAIAAAAAGIISDDESQQHLSPKIQDNRCQSPVSGSASDDASDSSQVKDTDKEDKKNPQVLDNCEFKAPATLCSIKRMHENCKNDQASPKAGTPLSARNRVLERLGSFESLFSPVRSRQSEDEDNFFSNTERDYGDELLIEWATENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFGDDSSNCSEAALDNTKLAAAEEALSLSVWTMATTCRVLSLDSVLTLITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGTMMDFLDAPVPYIVGIQHKPDDLNARTTNRVLVDLQKDKVTMCSLPRLPQHRDLYSQLSSIHATLSNQRSIARKHPVHRCNEVQAEAATQFLNILWHYLESLCANLKSHTITNVQSNKDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLTSFESGES 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02189 817 Gene3D - 110 334 - -
Viun1g02189 817 MobiDBLite consensus disorder prediction 381 428 - -
Viun1g02189 817 MobiDBLite consensus disorder prediction 29 52 - -
Viun1g02189 817 ProSiteProfiles Tripartite DENN domain profile. 159 815 IPR037516 -
Viun1g02189 817 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 56 812 - -
Viun1g02189 817 MobiDBLite consensus disorder prediction 381 410 - -
Viun1g02189 817 MobiDBLite consensus disorder prediction 330 357 - -
Viun1g02189 817 Pfam DENN (AEX-3) domain 586 688 IPR001194 -
Viun1g02189 817 SMART uDENN_cls 119 256 IPR005113 -
Viun1g02189 817 MobiDBLite consensus disorder prediction 337 353 - -
Viun1g02189 817 SMART DENN_cls 285 689 IPR001194 -
Viun1g02189 817 Gene3D - 586 751 IPR043153 -
Viun1g02189 817 MobiDBLite consensus disorder prediction 411 428 - -
Viun1g02189 817 Pfam uDENN domain 177 255 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02189 Viun-Chr1 33000876 33011269 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02189 - - gmx:100791254 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02189 1 33000876 33011269 Viun1g02189 1 33000876 33011269 ECH