Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02169 ATGCTGCTAAGAAGCTCTTCAACGCCAGTTCTTGGATCCCTCCTTTCCAACTTCACAGATAGTCCTAACAACAGTATTCACTCAGAAACCAGCCATGGAATTAAGCACTTTCCACCAACCAGCGTTCCCCAACATTATCACAAACTTCATGTCCCCCAAACTGGGTCCTTCACTCTCCCTTCCTTTTCATGTGGTTCTTCCCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGCAAAGCAAAGGCTTTAGAAGAGTTCAATCTGATGGGAACTTGCAAGACTTGGCCTACTGCAACAACGAAGACATGTTGGAATTTTCAGACCCTTCCAAGAGGTTTCCAACGAGGAACAGGTGCTTGGTGCTGGAGACCATTCCTTCTTTCTCGATTGGTAAGCACAATGGCCTGCGTGTAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGCGAAGAAGGGGAGGAGAACGGAAGAGAAGGGTTTAGTGTGGTGAATGGTGTGATATTGAGTGAAGCTGGGAAAGCGAGAGATGGAGTTTGCAGAGTGAGTTTTGATGAGCAGGAAGAGGGTGGAAGTGGTAAAGAAATGTATCTTGCAAAGGGGCTTGGAGTAGAGTGCTGTGGTGATGGCATAGGTGGCTGCAGAGGGGGTGGTGGAGGTAGCAGTGATCACAATCCTTTGGGTTCTGGAGGGAATGATGGAGATAGGCATGATGTGGAGGAATATTACAAGAAAATGGTGAAAGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCTAACTTTTTGTATCAGTTCAAACAGGATCGTGAAGGAGCGGAGGAGTACTATTCCCGAGCCATATTGGCAGACCCAAATGATGGAGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGGTACACCATGACCAAGAACGTGCCTCAAGCTATTTTGAAAGAGCAGTTCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTTTGGGACGCAGAGGAAGAGGAAGATGGTAACAATGAAGCACAGTGTTTGCCTCCTCATTCTCATCAGGGAGCTATGGCTACAGCAGGTGCTTGA 1092 0.467 MLLRSSSTPVLGSLLSNFTDSPNNSIHSETSHGIKHFPPTSVPQHYHKLHVPQTGSFTLPSFSCGSSPISPSIGELERQSKGFRRVQSDGNLQDLAYCNNEDMLEFSDPSKRFPTRNRCLVLETIPSFSIGKHNGLRVEEEDEEMESESEEGEENGREGFSVVNGVILSEAGKARDGVCRVSFDEQEEGGSGKEMYLAKGLGVECCGDGIGGCRGGGGGSSDHNPLGSGGNDGDRHDVEEYYKKMVKENPGDPLFLRNYANFLYQFKQDREGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDQERASSYFERAVQASPEDSHVHAAYASFLWDAEEEEDGNNEAQCLPPHSHQGAMATAGA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02169 363 SMART hat_new_1 303 335 IPR003107 GO:0006396
Viun1g02169 363 SMART hat_new_1 268 300 IPR003107 GO:0006396
Viun1g02169 363 SMART hat_new_1 233 265 IPR003107 GO:0006396
Viun1g02169 363 MobiDBLite consensus disorder prediction 135 158 - -
Viun1g02169 363 MobiDBLite consensus disorder prediction 340 363 - -
Viun1g02169 363 MobiDBLite consensus disorder prediction 18 41 - -
Viun1g02169 363 Gene3D Tetratricopeptide repeat domain 231 347 IPR011990 GO:0005515
Viun1g02169 363 MobiDBLite consensus disorder prediction 18 37 - -
Viun1g02169 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 337 - -
Viun1g02169 363 SUPERFAMILY TPR-like 233 340 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02169 - - gmx:100788436 517.694