Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02143 ATGGCAAGAGTCACGTTTTTTTCATTCTTCCCTCCCACTCTTTTACACACAATGACGAAAAAACCGTTACTCTGTTCGCTCCTTCTCCTCCTTGCCGTTCTTGCCGTCGCCGGAGCCACCTCTCCCGGTGTTGAGCTTGACTACTCCAAGCTCTCCGGCATTATAATCCCTGGCTTCGCTTCCACTCAGCTCCGAGCATGGTCCATTCTTGACTGTCCGTACTCTCCCCTCGATTTCAACCCTCTCGATTTGGTCTGGCTCGACACAACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGCATGGTGCTGGATCCGCACAACCAGACTGACCATCCGGATTGCAAGTCCCGCCCTGATAGTGGTCTTTCTGGTATTACAGAACTTGATCCAGGTTATATAACAGGACCTCTTTCATCGGTTTGGAAAGAATGGATTAAATGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCATATGACTGGAGATTGTCGCCCGCCATGCTTGAAGAGAGGGACCTTTATTTTCATAAGCTAAAATTAACATTTGAAACTGCTTACAAACTTCGTGGTGGACCTTCTATAGTTTTTGCCCATTCCTTGGGTAATCACGTTTTCCGTTATTTCTTAGAGTGGTTGAAGCTAGAGATTGCACCAAAGCATTATAATGAGTGGTTGGATCAGCATATTCATGCCTATTTTGCTGTTGGAGCTCCCTTTCTTGGAGCAATTGAAACCATTGAAGCAACTCTTTCTGGATTCACCTTTGGTCTTCCTATATCTGAGGGAACAGCGCGGTTGATGTTCAACTCCTTTGGTTCAGCACTATGGATGCTGCCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGGGGAAGGCATGCTGGTCAACCAACATATAAATGTGACGAGCAGGAGTTTCAGTCAAACTTTTCTGGGTGGCCAACAAAAATAATCAACATTGAAATTCCTTCAACACATGCATTTGATGCATACCCGTCATTCTCCGAAATACCGGAGTCCAACTTGTCCAGCATGGAGTGTGGGCTACCGACTCAATTATCATTCTCAGCTCGTGAAATATCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGATGCTACAGCTGTTACAAAAATCATATCTTGGTGATCCTGTTCTTAATCCCCTTACACCTTGGGAGCGGCCACCAATCAAAAATGTCTTCTGCATTTATGGGTCTGATTCAAAGACAAAGGTTGGTTACTATTTTGCTCCTAGTGGCAAGCCTTACCCCGATAACTGGATCATTACGGATGTCATGTATGAGTTTGAAGGATCTCTAATCTCTAGGTCAGGGACTCTGGTTGAAGGGAAAATTGGACCTATAAGTGGCGATGAGACGGTGCCATATCTCTCCCTTTCCTTGTGCAAGGACTGGCTTGGACCAAAAGTGAACATAACAAGAGCGCCTCAGTCAGAGCATGATGGTTCAGATGTACAGATTCAATTGAATGTGGAACATCACCATGAAGAAGATATTGTTCCAAAAATGACAAGATTGCCAAGGGTGAAGTACATAACATATTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGGAACATAG 1686 0.4377 MARVTFFSFFPPTLLHTMTKKPLLCSLLLLLAVLAVAGATSPGVELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPHNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPAMLEERDLYFHKLKLTFETAYKLRGGPSIVFAHSLGNHVFRYFLEWLKLEIAPKHYNEWLDQHIHAYFAVGAPFLGAIETIEATLSGFTFGLPISEGTARLMFNSFGSALWMLPFSKYCRTDNKYWKHFSGGRHAGQPTYKCDEQEFQSNFSGWPTKIINIEIPSTHAFDAYPSFSEIPESNLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRMLQLLQKSYLGDPVLNPLTPWERPPIKNVFCIYGSDSKTKVGYYFAPSGKPYPDNWIITDVMYEFEGSLISRSGTLVEGKIGPISGDETVPYLSLSLCKDWLGPKVNITRAPQSEHDGSDVQIQLNVEHHHEEDIVPKMTRLPRVKYITYYEDSESLPGKRTAVWELDKGT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02143 561 Gene3D alpha/beta hydrolase 109 268 IPR029058 -
Viun1g02143 561 Pfam Lecithin:cholesterol acyltransferase 83 519 IPR003386 GO:0006629|GO:0008374
Viun1g02143 561 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 50 506 - -
Viun1g02143 561 SUPERFAMILY alpha/beta-Hydrolases 180 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02143 Viun-Chr1 32694788 32703235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02143 47 559 Acyl Lipid Metabolism Gene Families AT1G04010 78.599 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02143 - - gmx:100806466 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02143 1 32694788 32703235 Viun1g02143 1 32694788 32703235 ECH