Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02135 ATGGAGGGGAGTGTGAATTGTCACCCATTACTGAGAGGAGGTAGAAGAGAGAAAGGTTACAGCCATGGGTTATCCACTTCTCAGATGCATGTCATGGCTTCTATTTGTCACACCCTCTTTCCTTTCGCACCATCGGAGGAAACTTCACAACACCAACAACCTCTCTCACCCTCTGTTTCTCATGTCCCTTTCCCTGAAGAGGCTGCGGAGCTTATGCGGAAGAGGGTTGTGCCAGAAGCATTGTCGCTGGTGAATTGGGTTCTTTGGATACTGTCCTTCAGATTGGGGACACTGTTGATCTGTGGAAGACTTTGTTTGGACTGGAAGTGGCCTTTCATCCACTGCTTCTCTGAGATCTCCTTCGACAAGAGAGAACAGATTCTCAGGAACTGGTGCAGGGAGAAGCGTTGGGTGCCCCTTCGGATAGTGTTTTTGCTCATCAAACTTACTTTCTTCTACACTTTCTTCTCGAGGGCTGATGAAAATGGACATAATCCCGCATGGGAAGCAATTGGATACAAGGTGGACACCAAGGAAAAGTTGGTACAGAAGAAGAGGCCTCTGCAAAAGGGATTAATAGAGACTATGTATGAAACTGATTCTACTTTGATGCAATCCCTCAGTGAAAAAGGCCTTGAAGTTACTGAAGATAAACTGCAGAACCTATACAAGGTAAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGTGGTGGAGTTGCAGCTGCAGTTCTTGCAAACTCTGGTCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTATTTTGTTTCCCATGATTATTCTTCCCTGGAAGGACCATCCATGAACGAGCTATACGAATCAGGTGGAATTCTGCCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACTGTGGGTGGTGGCTCTGCTGTAAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCGAAGAAAAATAAAATTCCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACACGGTATGCAGAAGGATTGGTGTGACAGAGAAGTGCAAGAAACAAGGCTTTCAGAATCAAATTCTCATACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAACCAGTGGCTACAAATTCCTCAGCAGATCATTATTGCGGTTCATGTTGTTATGGTTGTAGGACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGAAATGGTGCAGTGATCCTCTCGGGATGTAAAGCAGAGAGATTCATACTTGAAGATGAAAATGGTGGAATGAAGAAAAAGAAATGTTCAGGGGTTATTGCAGCAGCAACTTGGAGGAGTAAGGTGACAAAGAAACTCCTAATAGAATCCAAGGTAACTATTTCAGCATGTGGCTCTCTGTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCAGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGTGGCAATAACTATGAGGGTGGGATCATAACTTCAATCCACAAGGTATTTGCAGAAGATTCCACCCCAAGATTCATCATAGAAACACCTTCGCTAGGACCAGGATCGTTTTCAGCATTGGCTCCCTGGCTTTCAGCACATGACATGAAAGACAGGATGGAAAAGTATGCAAGAACTGCTAACATTTTTACCTTGATTAGAGACCATGGATCAGGAGAAGTTAAATCTGAAGGGAGAATAACTTACAGACTTGACCAGGTGGACAAAGAAAACCTTAGAATTGGACTGAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTTGGCACATTCAGGAGTGATGGCCAAAGACTGAAATGTAGGGGAATGAAGGAGGAAGATTTAGAGGAATTTGTTGACAGTGTGACAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGGCAGTGCTTACATCTGCACATCAGATGACAAGTTGTAGAATGGGTGCTACTGAAGAAGAAGGTGCAGTTGATGAAAATGGTGAGAGTTGGGAAGCAAAAGGGTTGTATGTGTGTGATGGGAGTGTTTTGCCCAGTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCTACAGTATACTGTATTGCCACCAAGATTGCAGAGTCACTTAGCAAAGGCAAACAAATCATAAATACTTAA 2220 0.4428 MEGSVNCHPLLRGGRREKGYSHGLSTSQMHVMASICHTLFPFAPSEETSQHQQPLSPSVSHVPFPEEAAELMRKRVVPEALSLVNWVLWILSFRLGTLLICGRLCLDWKWPFIHCFSEISFDKREQILRNWCREKRWVPLRIVFLLIKLTFFYTFFSRADENGHNPAWEAIGYKVDTKEKLVQKKRPLQKGLIETMYETDSTLMQSLSEKGLEVTEDKLQNLYKVKCDVVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVSHDYSSLEGPSMNELYESGGILPSLDGKMMILAGSTVGGGSAVNWSACIRTPDSVLREWSKKNKIPLFASSDYQSAMDTVCRRIGVTEKCKKQGFQNQILIQGCEKMGLKVEPVATNSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILSGCKAERFILEDENGGMKKKKCSGVIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGNNYEGGIITSIHKVFAEDSTPRFIIETPSLGPGSFSALAPWLSAHDMKDRMEKYARTANIFTLIRDHGSGEVKSEGRITYRLDQVDKENLRIGLRKALRILVAAGAVEVGTFRSDGQRLKCRGMKEEDLEEFVDSVTIVGGPRSRNELWAVLTSAHQMTSCRMGATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTVYCIATKIAESLSKGKQIINT 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02135 739 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 20 735 - -
Viun1g02135 739 Pfam GMC oxidoreductase 588 716 IPR007867 GO:0016614
Viun1g02135 739 Gene3D - 655 737 IPR036188 -
Viun1g02135 739 PIRSF Lg_Ch_AO 10 736 IPR012400 GO:0046577
Viun1g02135 739 Gene3D - 212 523 IPR036188 -
Viun1g02135 739 Pfam GMC oxidoreductase 228 495 IPR000172 GO:0016614|GO:0050660
Viun1g02135 739 SUPERFAMILY FAD/NAD(P)-binding domain 226 733 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02135 Viun-Chr1 32660050 32663852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02135 8 736 Acyl Lipid Metabolism Gene Families AT4G28570 58.356 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02135 K17756 - gmx:100808951 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02135 1 32660050 32663852 Viun1g02135 1 32660050 32663852 ECH