Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02133 ATGGCGACGGCGGGATTGTATCGACGCCTTCTTCCTTGTCCTCCCGCCGTCGAATTTGCTTCCTCACAAGGCAAGGAACTTTTTCTTGAAGCCATTCACAATGGAACCATGGAAGGCTTTTACAAGTTGGTTTCCCACTTTCAAACACAATCCGAGCCCGCTTTCTGCGGTCTCGCTAGCTTGTCTATGGTCCTCAATGCTCTTGCCATTGATCCTGGAAGGAAGTGGAAAGGGCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGCTGTGAATCTCTAGAAGAGGTCAAAGTTAAGGGCATCACGTTTGGGAAGCTTGTGTGTTTGGCTCAATGTGCTGGGGCCAAAGTTGATTACTTTCGGGCTAGCCATAGCACCATTGATGATTTTCGTAAATATGTGATCAAGTGTTCAATGTCTGATGACTGTCACGTTATCTCCTCATACCATAGAGCTGCCCTTAAGCAAACTGGAACTGGTCACTTTTCTCCTATTGGAGGATATCACGCTGGAAAGGACATGGCACTTGTTTTGGACGTTGCACGATTTAAGTATCCTCCCCATTGGATTCCTCTTAAAATTCTTTGGGAAGGTATGAATTATATCGACGAGGCTACTGGACGAACTAGAGGATTCATGCTTGTATCAAGGCCTCATAGGGAACCTGGATTGCTTTATACTCTGAGCTGCAAACACGAGAGTTGGATTAATATTGCAAAATTCCTAATGGACGATGTTCCTCTTCTATTAAAATCAGAGAATGTGAAAGACATTCATCAAGTTGTTTCAATTATAGTCTCATCACTGCCATCCAAGTCTGAACAATTTATCAAGTGGGTGGCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTAAGCACAGAGGAGAAAGCAAGGCTTGCTATCAAGGAAGAGGTATTGAAACAGGTCCAGGAGACCGGCCTTTTCAAACATGTAGCTTCCTTTCTGTCAAATTCTTGCAGCAGGGAATCACCAGATGATGCAGATGCGTTACCTGCCATTGCTGCAAGTATTTGTTGTCAAGGAGCAGAAATTTTTGCTGGGAAACCTTGGTCACAAGCAGGGTATAGCTGTAAAGTAACATGTATGAAATGCCTGAAAGTTGAAGATGACAAGCCAATAACAATGGTTTCTGGGACTGTGGTAAAGGGTAACACTGAGCAAGGTGTTGATGTGTTGATTCCTTCATCGAATAGGAAATTATGTAGCAATTGCTCTATGAGGATGCATCCAGCTAGCACTGATGTGCTAACAGTGCTTCTACTGTCCTTACCATCTACAACATGGGCCGGCATCAAAGATGAGCAGCTTTTGACAGAAATACAATGTCTGGTTTCAACTGAAAACCTTCCCTCTTTGCTTCAAGAAGAGGTTCTGCATTTGAGACGTCAGCTTCACCTTCTCAAGAGATGTCAAGAGGGTAAGGTTGATCAGGATCTTGGTGCTCCTCTCTCTTAG 1485 0.4424 MATAGLYRRLLPCPPAVEFASSQGKELFLEAIHNGTMEGFYKLVSHFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCESLEEVKVKGITFGKLVCLAQCAGAKVDYFRASHSTIDDFRKYVIKCSMSDDCHVISSYHRAALKQTGTGHFSPIGGYHAGKDMALVLDVARFKYPPHWIPLKILWEGMNYIDEATGRTRGFMLVSRPHREPGLLYTLSCKHESWINIAKFLMDDVPLLLKSENVKDIHQVVSIIVSSLPSKSEQFIKWVAEIRRREDGGPSLSTEEKARLAIKEEVLKQVQETGLFKHVASFLSNSCSRESPDDADALPAIAASICCQGAEIFAGKPWSQAGYSCKVTCMKCLKVEDDKPITMVSGTVVKGNTEQGVDVLIPSSNRKLCSNCSMRMHPASTDVLTVLLLSLPSTTWAGIKDEQLLTEIQCLVSTENLPSLLQEEVLHLRRQLHLLKRCQEGKVDQDLGAPLS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02133 494 Pfam Domain of unknown function (DUF1984) 231 474 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Viun1g02133 494 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 473 IPR040409 GO:0016756|GO:0046872|GO:0046938
Viun1g02133 494 Gene3D - 16 220 IPR038156 -
Viun1g02133 494 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Viun1g02133 494 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Viun1g02133 494 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Viun1g02133 494 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02133 Viun-Chr1 32580240 32583495 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02133 K05941 - gmx:547627 845.114