LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g02118	ATGGGTTCTCTTCCTTCGCCGGCATTCCCAGACGCGGCGGCGAAACATAGCCTTGACGAGAGCAGCCACATTGACGAGAGCGCCCTCACGACGCTGTTCAAGTCCCAGCAGAGCCACCTCAACTTCTTCTTCGAACACATAGACCACTCCCAAACCCTAGCCTTCACGCGCGCCCTCCTTAACGCCACAGGCACAGTCTTCTTCACTGGTGTCGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCGCAGACGCTCGTCTCGCTCGGCATCCGCTCCGCCTTCCTGTCGCCGGTCGACGCGCTCCACGGTGACATCGGGATCCTCACCGAACGTGATGTGCTCGTCCTCCTCAGCAAGTCAGGCGCCACCGAGGAGCTCCTCCACCTGGTGCCTTGCGCGAGGGCGAAGGGCGCACTCCTCATCGCGCTCACCTCCGTCGAAGGTAACGCGCTGGCCGCGGCGTGCGACATGGCCGTGCATTTGCCTCTCCAGAGAGAGCTCTGTCCGTTCAACCTTGCGCCGGTCACATCCACCGCTATTCAGATGGTTTTCGGGGACACCGTGGCCATCGCGCTCATGGAGGCCAGGAATCTCACCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATCGGGAAGAGTCTCATCTTCAAGGTGAAGGATGTGATGAGGAAACAGGACGACCTTCCGATTTGCAGAGAATCGGATTTGATTATGGATCAGCTTGTGGAACTGACGAGTAAAGGATGCGGATGCCTCCTTGTGATCGATGACCGGTACCGTCTGATAGGAACGTTCACCGACGGTGATCTTCGTCGCACTCTCCGAGCCAGTGGGGAAGCCATTTTCAAACTCACTGTGGGGAAGATGTGCAACAGGAATCCAAGAATTATTGGCCCGGAGGCTATGGCGGTGCAGGCGATGAAGAAGATGGAGGCACCTCCGTCGCCTGTTCAGTTTTTACCTGTGATAAACGATGAGAATATTTTAATTGGGATTGTGACCTTGCATGGTTTGGTTTCTGCTGGCTTGTGA	1038	0.5732	MGSLPSPAFPDAAAKHSLDESSHIDESALTTLFKSQQSHLNFFFEHIDHSQTLAFTRALLNATGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTERDVLVLLSKSGATEELLHLVPCARAKGALLIALTSVEGNALAAACDMAVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMRKQDDLPICRESDLIMDQLVELTSKGCGCLLVIDDRYRLIGTFTDGDLRRTLRASGEAIFKLTVGKMCNRNPRIIGPEAMAVQAMKKMEAPPSPVQFLPVINDENILIGIVTLHGLVSAGL	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g02118	345	PIRSF	KdsD_KpsF	13	345	IPR004800	GO:0005975\|GO:0016853
	Viun1g02118	345	ProSiteProfiles	SIS domain profile.	55	198	IPR001347	GO:0097367\|GO:1901135
	Viun1g02118	345	NCBIfam	KpsF/GutQ family sugar-phosphate isomerase	64	335	IPR004800	GO:0005975\|GO:0016853
	Viun1g02118	345	SUPERFAMILY	SIS domain	36	344	IPR046348	GO:0097367\|GO:1901135
	Viun1g02118	345	Pfam	CBS domain	288	343	IPR000644	-
	Viun1g02118	345	Pfam	CBS domain	220	276	IPR000644	-
	Viun1g02118	345	CDD	CBS_pair_SIS_assoc	216	341	-	-
	Viun1g02118	345	Gene3D	-	215	343	IPR046342	-
	Viun1g02118	345	ProSiteProfiles	CBS domain profile.	224	283	IPR000644	-
	Viun1g02118	345	Gene3D	-	24	214	-	-
	Viun1g02118	345	Pfam	SIS domain	64	190	IPR001347	GO:0097367\|GO:1901135
	Viun1g02118	345	CDD	SIS_Kpsf	64	191	IPR035474	-
	Viun1g02118	345	PANTHER	-	15	345	-	-
	Viun1g02118	345	ProSiteProfiles	CBS domain profile.	292	345	IPR000644	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g02118	Viun-Chr1	32471664	32473366	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g02118	K06041		-	gmx:100805755	626.32

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun1g02118	1	32471664	32473366	Viun1g02118	1	32471664	32473366	ECH