Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02088 ATGGCGTTCTCTTCGTTTCTCGGCAGAGTCCTCTTTGCGTCCGTTTTCATCCTCTCTGCTTACCAAGAATTTAATGCTTATGGGGTTGATGGCGGACCCGCAGCAAAAGCACTGAGACCGAAGTTTGATGCATTTGCCCATCAAGTACATTCTAGAGTTGGATTTCAACTTCCGGATATCGATATGAAGTTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCATTGGAGGGATTCTTTTCATACTTGGCAGCTCTTTTGGAGCTCTCCTTTTGCTTTTGCATCAAGTGATTACTACTCCCATACTGTATGATTTCTACAATTATGACAGCGAGGACAAAGGATTTATTCAACTTTTCATCAAATTTACTCAGAATATGGCCCTCTTCGGTGCTTTGTTGTTTTTCGTTGGGATGAAAAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACCTATTAG 474 0.4241 MAFSSFLGRVLFASVFILSAYQEFNAYGVDGGPAAKALRPKFDAFAHQVHSRVGFQLPDIDMKFLVAGAIALKGIGGILFILGSSFGALLLLLHQVITTPILYDFYNYDSEDKGFIQLFIKFTQNMALFGALLFFVGMKNSIPRRQPKKKAPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02088 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Viun1g02088 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02088 Viun-Chr1 32254616 32257991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02088 - - gmx:100817488 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02088 1 32254616 32257991 Viun1g02088 1 32254616 32257991 ECH
Viun1g02088 1 32254616 32257991 Viun7g00127 7 805480 807680 PCT
Viun7g01376 7 17043620 17046059 Viun1g02088 1 32254616 32257991 PCT