Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02082 ATGGATTCGTCAAACGACGTCGCTTTGGTTTCCTCTGAGATGGAGAAGTTCCTGTGCGAGTTGTTGCTGGATTCATCCCAGCCAATTTCTGAGCGCTTCAGGGCACTATTCTCTCTCCGCAACCTCAAAGGCCCCGCCCCTCGCGATGCCCTTATTCTCGCCACAAGGGATGAATCGAATTTGTTGGCGCACGAAGCTGCATTTGCGTTGGGTCAAATGCAGGAATTTGAAGCAATTCCTGCTTTGACTTCAGTTCTAAATGATCTCTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAGGCATTGGGTGCTATTGGTTCAGAAGGTAATGTTCCTCTCCTGAAGAATAGTTTGGATTCGGATCCGGCCGAGGAAGTTCGAGAAACATGTGAGTTGGCTCTTCAACGAATTCAGCATTTGAAAGATGCTGGCAATACTGATGAATTGGCTGCAACTGAACTATCGCCTTTCAAGTCTGTTGATCCAGCCGTGCCAGCGACCTCTTGTGCTTCTGTTCAACAACTTAGGGAAGTACTTCTTGATGAAGAAAAAGGGATGCATGAACGCTATGCAGCTCTTTTTGCACTTCGCAATGATGGTGGACATGAAGCTGTTGCTTCTATTATTGATTCCTTGAGCTCGAAAAGTGCTCTACTGCGCCATGAGGTTGCATATGTTTTGGGTCAATTGCAAGACAAAGCTGCTTCTGCTGCTCTATCCAATATACTTAAAGATGTGAAGGAGCACCCGATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGATCAAAGTGTAGCACTTCTTGAGGAATTTACGGCAGATCCAGAGCCTCTTGTCTCTCAAAGTTGCGAAGTTGCTCTAAGCATGCTAAAATTTGAACGATCAGGGAAATCATTCGAGTTTCTGTTCATGCCAACTCCAACTGTGCATTAA 948 0.461 MDSSNDVALVSSEMEKFLCELLLDSSQPISERFRALFSLRNLKGPAPRDALILATRDESNLLAHEAAFALGQMQEFEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSEGNVPLLKNSLDSDPAEEVRETCELALQRIQHLKDAGNTDELAATELSPFKSVDPAVPATSCASVQQLREVLLDEEKGMHERYAALFALRNDGGHEAVASIIDSLSSKSALLRHEVAYVLGQLQDKAASAALSNILKDVKEHPMVRHEAAEALGSIADDQSVALLEEFTADPEPLVSQSCEVALSMLKFERSGKSFEFLFMPTPTVH 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02082 315 Pfam HEAT repeats 51 135 - -
Viun1g02082 315 Pfam HEAT repeats 210 292 - -
Viun1g02082 315 SMART E-Z type HEAT repeats 218 247 IPR004155 -
Viun1g02082 315 SMART E-Z type HEAT repeats 29 58 IPR004155 -
Viun1g02082 315 SMART E-Z type HEAT repeats 60 89 IPR004155 -
Viun1g02082 315 SMART E-Z type HEAT repeats 187 216 IPR004155 -
Viun1g02082 315 SMART E-Z type HEAT repeats 93 122 IPR004155 -
Viun1g02082 315 SMART E-Z type HEAT repeats 251 280 IPR004155 -
Viun1g02082 315 FunFam Deoxyhypusine hydroxylase 164 305 - -
Viun1g02082 315 SUPERFAMILY ARM repeat 13 88 IPR016024 -
Viun1g02082 315 SUPERFAMILY ARM repeat 92 294 IPR016024 -
Viun1g02082 315 Coils Coil 124 144 - -
Viun1g02082 315 Gene3D - 151 303 IPR011989 -
Viun1g02082 315 Gene3D - 8 150 IPR011989 -
Viun1g02082 315 PANTHER PBS LYASE HEAT-LIKE PROTEIN 15 300 - -
Viun1g02082 315 FunFam Deoxyhypusine hydroxylase 6 156 - -
Viun1g02082 315 Hamap Deoxyhypusine hydroxylase [DOHH]. 15 305 IPR027517 GO:0008612|GO:0019135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02082 Viun-Chr1 32185971 32195680 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02082 K06072 - gmx:100815364 519.62