Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02077 ATGAATTCCGTCTGTGATGGTGGCGCCACCGTAATCCCGGGTCTCCCAAACGACGTCGCGGCGTGGATCCTCTCCAAGGTGCCATACTCGCACCACGCGAGACTGAAAAGCACTTGCAAATCATGGAAACTGCTTTTGTCTTCGAGATCGTTCCTAAACTCTTTGAATAAGAGGAACCATCTTCTCTGCATCTTCCCGCAGGACCCATCGATCGCGTCGCCGTTCCTCTTCGACCCCAACGCGCTCGCCTGGTGCCCGCTCCCTCCCATGCCCTGCAACCCCCACGTGTACGGCCTCTGCAACTTCGCCGCGGTGCCTCTTGGGCCCCACCTTTACGTTCTCGGGGGTTCCCTCTTCGACACGCGCTCCTTCCCAATCGATCGCCCCTCGCCCTCCTCCGCCACCTTCCGCTTCAACTTCCACGACTTCTCCTGGGAGCCACGCGCCCCCATGCTCACGCCGCGGGGCAGTTTCGCCTGCGCCGTCGTCCAGGGGCGTATTCTTGTCGCCGGCGGGGGGTCGCGCCATACGATGTTTGGGGCTGCTGGGACTAGGATTCGGTCGGTTGAGCGGTACGAGGTGGGGAGAGACCGGTGGGTGGCGATGGATCCGCTGCCCGGGTTTCGGGCCGGGTGTGTGGGGTTTGTTGGCGGGGGAGGGAGGGAGTTCTGGGTGGTGGGAGGGTACGGCGCGTCGCGGACCATATCCGGGGTTTTTCCGGTGGATGAGTATTACAGGGATGCAGTGGTGATGGGATTTGAGGGTGGGGCGTGGCGGGAGGTTGGGGATGTGTGGGGGGACGGGGAGAGAGTGAGGGTTGGGAAGATTGTGGTGGTGGATGATGATGAATGTCCCACGCTTTTCATGCTTGATGGGAACGAGATTTTGAGATATGAGATGTGTTGCAATCGTTGGGTATACGAGTGTCGTGTGCCAAGAAAAGCTCCTTACAATTCGTCATTTGGTTTTGTAGTATTAGCGGGGGAGCTGTATGTAGTGACACACTTATGCGTTGTTGATTTTTCAGAAACACGAAGGTCGAGACAGCAAAAGAGGGCAGGAACAGTGTTCATTCAAATCTATGACCCAAAAAATAAGAGCTGGAGATCTCTAGTTTCGAAATCACCTTTCAATTATCCAATAGATATTAATAGTGCTGTATTCAGCTCAATTTCTCTATGA 1182 0.5601 MNSVCDGGATVIPGLPNDVAAWILSKVPYSHHARLKSTCKSWKLLLSSRSFLNSLNKRNHLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPHVYGLCNFAAVPLGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLTPRGSFACAVVQGRILVAGGGSRHTMFGAAGTRIRSVERYEVGRDRWVAMDPLPGFRAGCVGFVGGGGREFWVVGGYGASRTISGVFPVDEYYRDAVVMGFEGGAWREVGDVWGDGERVRVGKIVVVDDDECPTLFMLDGNEILRYEMCCNRWVYECRVPRKAPYNSSFGFVVLAGELYVVTHLCVVDFSETRRSRQQKRAGTVFIQIYDPKNKSWRSLVSKSPFNYPIDINSAVFSSISL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02077 393 SUPERFAMILY Kelch motif 66 372 IPR015915 GO:0005515
Viun1g02077 393 SMART kelc_smart 110 165 IPR006652 GO:0005515
Viun1g02077 393 SMART kelc_smart 166 219 IPR006652 GO:0005515
Viun1g02077 393 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 9 393 - -
Viun1g02077 393 Gene3D - 56 380 IPR015915 GO:0005515
Viun1g02077 393 SUPERFAMILY F-box domain 10 68 IPR036047 GO:0005515
Viun1g02077 393 Pfam Kelch motif 154 206 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02077 Viun-Chr1 32148078 32151032 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02077 - - gmx:100820159 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02077 1 32148078 32151032 Viun1g02077 1 32148078 32151032 ECH