Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02070 ATGGTTTTCTCCCCTCACTCCCCTCAAACTTGTTCAGATTATGATGTCAAACCCAGTTTTACACAGATCACCGTAGCCATTTCTGTGGGGTTGTTCTTTATCGTGATCTTTCACTTTCGTCTGAAACATTCTAGAGATCGAAAGATCATCCCACGTATAAGATTATCACGCGCAAGCCACGTCCCAAAGCTTGAAAGATTCTCGCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGAAGATTTTGTCCCCATCTATGTAGATTAGCTTCTGAATACATAAGGAAATACGAGGGACTTGAAGATGATATATACGCCTTTTTTGAGAATGAACCCGATGCAGATTCACTTTATGTGAAACTGGTTGAGGAGTTTGAGAGATGCATTCTTAGTTACTTAGCATTTCATTGGAACTACGGTGACACAATTATGAGTCAGGTGTTGAGCTCGGAAAACGAGCCAAAAAAGAAGCTCAAGCACATAGTTATGGCAGCAACTAGAGAGCAAAGGTTCGAGAGACTTGCCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACCTTAGTGGAAGAAATGAAAGCGATGGGAATTGCTACAACTGATGATTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCATAGCGATAGGAGCCCAGTGCTCCTTTTAATGGGTGGAGGCATGGGAGCTGGCAAGAGCACCGTGCTCAAGGATATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCCGGGAATGCCGTAATCATTGAGGCAGATGCGTTCAAAGAATCAGATGTGATCTACAAGGCCCTGAGCTCAAGGGGTCACCATGACATGATTCAAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCACTCTTAGTTACAGCACTAAATGAAGGACGAGATGTGATCATGGATGGCACACTGTCCTGGGTGCCCTTTGTTGTGCAGACAATTACAATGGCTAGGAACGTTCACCGTCGACGTTACCGCATGGGAGCTGGCTACAGAGTGAAGGATGATGGAAGTGTAATTGAAAACTATTGGGAGAGAATTCAAGGCGAAGAGCCTGAACAAGTTGAAGGCAAAAAGCGAAAACCATATAGGATAGAGCTTGTTGGTGTAGTATGTGATGCTTATCTTGCAGTTGTTAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAGTAAACTCACAGTTGAAATCACACAAGAGATTTGCTCAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGACTATACTTCACAAATGCATTGGAAGGTCCACCCAAGTTAATAGGATGGAAAGACAGAGACAAGACACTGCTTGTTGATCCAGATGAGTTCGACTGTTTGAAGAGGCTTGCGAAGTTGAACGAAAATGCGAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATCGTATTGTCTCCTTCAAGGTTGAACATTCAACAGGAGCTCAAGTACTCCATCCAAAGAATTGAAAGCGTCAGATACAGCTTCACCCTTGAGTAA 1572 0.4377 MVFSPHSPQTCSDYDVKPSFTQITVAISVGLFFIVIFHFRLKHSRDRKIIPRIRLSRASHVPKLERFSHYVARQMGFKDRRFCPHLCRLASEYIRKYEGLEDDIYAFFENEPDADSLYVKLVEEFERCILSYLAFHWNYGDTIMSQVLSSENEPKKKLKHIVMAATREQRFERLAKNLKVARVFNTLVEEMKAMGIATTDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYRVKDDGSVIENYWERIQGEEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLKSHKRFAQAFMTYCQLVDNARLYFTNALEGPPKLIGWKDRDKTLLVDPDEFDCLKRLAKLNENANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQRIESVRYSFTLE 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02070 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 341 IPR027417 -
Viun1g02070 523 Gene3D - 201 436 IPR027417 -
Viun1g02070 523 Pfam Zeta toxin 212 324 IPR010488 GO:0005524|GO:0016301
Viun1g02070 523 PANTHER UNCHARACTERIZED 13 517 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02070 Viun-Chr1 32039398 32043407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02070 - - gmx:100794775 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02070 1 32039398 32043407 Viun1g02070 1 32039398 32043407 ECH
Viun1g02070 1 32039398 32043407 Viun7g01443 7 18578517 18581158 PCT