Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02062 ATGGCTTCATCAATGGCAACCATGGTCGTCCCTTTCCCACAAACACAGAAGAACCAAGCCCGCACCTTCCTATCCCAACCACCAACCACCGTAAAGAAACTGAAACCCAAAGACACCAAAGCTTCAAAAACTCACACAACCAACATAAAATGCAGTGCAACGCTTTCATCTACAGTGCAGAGCATCGAGAAGGAGGAAGGGAAGAAACAAAAGGCAGTGGCGGAGGTGTGGCGAAAGATCCACGGGGAGGACAACTGGGCCGGCCTTCTGGAACCCTTGGACCCGTTAATGCGGACCGAGCTGATCCGCTACGGGGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTACGACCCCTACTCCAAATACTGCGGCAGCTGCAAGTACTCCATACCCGAGTTCTTCCAATCCCTCGACATGCCCAACGCGGGATACAACGTCACACGCTATCTCTACGCCACGGCCAACATCAACCTCCCCAAATTCTTCCGCAAATCGCGGTGGGCCGACAAGACGTGGAGCCAGCACGCGAACTGGTCGGGCTTCATTGCGGTGTCGGACGACGCAACCAGCAAGCGTCTGGGGCGGAGGGACATCACGATCGCGTGGCGAGGGACGGTGACGAACATGGAGTGGGTGGCTGACCTGACGAACTACCTCAGACCGGTGGCTCCCTTCATCCCCAGTCCCGACGAGGGTGTAAAGGTGGAGGCTGGTTTCTTGGATCTTTACACGGACAAGGAACAGGAGTGTGGGTATTGTAAGTACTCGGCGAGGGAGCAGGTTCTCGGGGAGGTGAAACGGTTGATGGCGATTTATTCCGATGAAGAGGTGAGTATTACGATAACGGGGCATAGTCTGGGGAGTGCGATGGCGATACTGAGTGCCTACGATATTACGGAGAGTGGGGCGAGTGTGGGAAAGAGTGGGAGAAAAGCGCACGTTTCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGCGAGGTTCAAGGATAGGTTGGAGGGGGAGCTGGGGGTGAAGGTGCTGAGGGTGCTTAACAAGCACGACCTTGTGCCGCAGTCGCCGGGGTTGGTGTTCAACGAGGGGTTGCCGCCGTGGGTGGTGAAGCTTGTCCACTGGTTGCCTTGGTGTTATTTGCACGTTGGGGAGGAGGTGGAGTTGGATCATAAGAAATCACCTTTCTTGAACCCCAATGGTGATCCTGCCTGCGCCCATAACTTGGAGGCTATGATGCACTTGCTTGATGGATACCATTCGAAGTATGATCCATTCAAGAGGACGAGTGAGAGGGACGTTGCTTTGGTGAACAAGGCATGTGACTTCTTGAAGGACGAGTATAAGGTGCCACCAAACTGGAGGCAAGAGCTGAACAAGAACATGATAAAGACCGAAGGTGGACGCTGGGTCTTCACTGAGCGTGAAGTGTGTCAAGATCCACACCACGAAGATATTGATCCTCATCTCGGGGAACTGGGTCTCTTCTCTTTTGACAAATCAACCAATCAGTAA 1512 0.543 MASSMATMVVPFPQTQKNQARTFLSQPPTTVKKLKPKDTKASKTHTTNIKCSATLSSTVQSIEKEEGKKQKAVAEVWRKIHGEDNWAGLLEPLDPLMRTELIRYGEMAQACYDAFDYDPYSKYCGSCKYSIPEFFQSLDMPNAGYNVTRYLYATANINLPKFFRKSRWADKTWSQHANWSGFIAVSDDATSKRLGRRDITIAWRGTVTNMEWVADLTNYLRPVAPFIPSPDEGVKVEAGFLDLYTDKEQECGYCKYSAREQVLGEVKRLMAIYSDEEVSITITGHSLGSAMAILSAYDITESGASVGKSGRKAHVSVFSFSGPRVGNARFKDRLEGELGVKVLRVLNKHDLVPQSPGLVFNEGLPPWVVKLVHWLPWCYLHVGEEVELDHKKSPFLNPNGDPACAHNLEAMMHLLDGYHSKYDPFKRTSERDVALVNKACDFLKDEYKVPPNWRQELNKNMIKTEGGRWVFTEREVCQDPHHEDIDPHLGELGLFSFDKSTNQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02062 503 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 21 475 - -
Viun1g02062 503 MobiDBLite consensus disorder prediction 18 46 - -
Viun1g02062 503 Gene3D alpha/beta hydrolase 76 484 IPR029058 -
Viun1g02062 503 FunFam Phospholipase A1-II 3 76 481 - -
Viun1g02062 503 CDD Lipase_3 133 390 - -
Viun1g02062 503 SUPERFAMILY alpha/beta-Hydrolases 100 417 IPR029058 -
Viun1g02062 503 Pfam Lipase (class 3) 201 358 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02062 Viun-Chr1 31944165 31948035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02062 58 494 Acyl Lipid Metabolism Gene Families AT2G30550 58.108 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02062 - - gmx:100815007 748.429