Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02052 ATGCCTTTCACAATGAAGATTCAGCCAATTGATTCGCCCGTTCACGAGGAGGCCATTCGGCTTGAGCCGGTGAAGCCAGTGATGAAGTCGCGGCTGAAGCGACTCTTGGAGCGCCAGTTCTCTGGCGTCCTCCGCAATTCGGCGGCAGAGAAGATCGTGGCCGAGGAGCTGCCGCGTTCCGGCAAAGATGGTTTCGCTGATTTCGAACCTAGCTCAGCGTGTCTGGCGAAGATGGTGCAGAGTTTCATGGAGGAGAATCACGAGAAGCATTCCGCTGCCGTGAAATGCGCGCGTAACCGCTACAACAGCTTCGAGGATAGCTCTGACGCCGAAACGCAAGCGTTTGGTAGTTTTAGCGACTCGAGTTATTCTTCCTCTGGTGAAACACAGGAAATCCTCAAGGGTTTGGTGGCATGTGCGAGTGTGTATGAGAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAACAAGGCAACGTGCAAACGCAAGGACGGTTGTTGCAGAAAGATCGTCACTGAAGGGTTGTTGGCTCTCGGATACGACGCTTCTGTATGCAAATCTCGCTGGGAAAAATCAACGTTTTGCCCTGCCGGTGAATATGAATACATTGATGTGATAATGGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATTGCTCGACCCACCAAGACATACAAAGCGATCCTCCATACTCTTCCTTACGTGTTCGTCGGCACGTGCGACCGGTTGCAGAGCATCGTGGCAATCGCTTCGGAGGCGGCGAAACTGAGTCTGAAGAAAAGGTGCATGCATGTTCCGCCGTGGAGAAAAGCGGAATACGTCAAAGCCAAATGGCTCTCCCCCTACACATGCTCGCGTGGAGTCAAAGAGGAGACCGAAGAGAAAAAGCAGCTTGCGGAAGCGTTGTTGTTAACTGCTGCTGCATGCGAAACTTCCCGTGAAGATGATGAAAAATCAAAGTCAAAATTGGTGGTTCAGAAGCCACTGGAGATAAAACCAAAGAGCTCACAGTCCGGTTTGGCAGCTGTGTTCCATGAAAAACCGTGA 1071 0.5117 MPFTMKIQPIDSPVHEEAIRLEPVKPVMKSRLKRLLERQFSGVLRNSAAEKIVAEELPRSGKDGFADFEPSSACLAKMVQSFMEENHEKHSAAVKCARNRYNSFEDSSDAETQAFGSFSDSSYSSSGETQEILKGLVACASVYERNLLADTTKIIEKNKATCKRKDGCCRKIVTEGLLALGYDASVCKSRWEKSTFCPAGEYEYIDVIMGKERVVVDVDFRSEFEIARPTKTYKAILHTLPYVFVGTCDRLQSIVAIASEAAKLSLKKRCMHVPPWRKAEYVKAKWLSPYTCSRGVKEETEEKKQLAEALLLTAAACETSREDDEKSKSKLVVQKPLEIKPKSSQSGLAAVFHEKP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02052 356 PANTHER OS03G0796600 PROTEIN 28 300 IPR006502 -
Viun1g02052 356 Pfam PDDEXK-like family of unknown function 77 291 IPR006502 -
Viun1g02052 356 NCBIfam uncharacterized plant-specific domain TIGR01615 170 291 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02052 Viun-Chr1 31853758 31856230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02052 - - gmx:100796711 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02052 1 31853758 31856230 Viun1g02052 1 31853758 31856230 ECH
Viun1g02052 1 31853758 31856230 Viun7g01490 7 19308421 19310557 PCT