Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02039 ATGGATTGGTTTTCAAAGATTTACACAGTCGTGATCTCTTTGGTTGGTTTCATAATCTGTCATGGCTTTGCTCTCTCAATCAGTTTATATGACAGGGAATGCGTATCTGAACATGTTCTACACGATGGTGACACTGTTTCTGGGAATTTCGTAGTCATTGACTACGATATTTTTTGGAGCTCAGATCATCCAGGAATCGATTTCAGTGTTACATCTCCGGCAGGGAGTGTGGTGTACTCTTTGAAGGGAACATCAGGGGACAAATTTCAATTCAAAGCCGCAATACATGGAATATATAAGTTTTGCTTTCAAAACCCCGCTTCAACGCCAGAAACAGTGTCTTTCTACATTCACGTTGGTCACATCCCAAATGAACATGACTTAGCCAAAGATGAACATTTGGATCCCATTAATGTGAAGATTGCTGAGTTGCGAGAAGCACTGGAATCTATTATAATAGAGCAGAAGTACTTGAAAGCACGTGATACTAGACATCGACACACAAATGAAAGCACTAGAAAACGTGTGGTTTTCTACACAATCTTGGAGTATGTTTTGTTCGCTGCAACCAGTTTATTACAAGTTGTATACATTCGACGTCTCTTCAGCAAATCATTTGCTTACAACCGAGTATAG 636 0.3978 MDWFSKIYTVVISLVGFIICHGFALSISLYDRECVSEHVLHDGDTVSGNFVVIDYDIFWSSDHPGIDFSVTSPAGSVVYSLKGTSGDKFQFKAAIHGIYKFCFQNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESIIIEQKYLKARDTRHRHTNESTRKRVVFYTILEYVLFAATSLLQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02039 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Viun1g02039 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Viun1g02039 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 23 204 IPR015720 -
Viun1g02039 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 39 128 IPR036598 -
Viun1g02039 211 Pfam emp24/gp25L/p24 family/GOLD 30 202 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02039 Viun-Chr1 31764822 31765962 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02039 K20347 - gmx:100789501 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02039 1 31764822 31765962 Viun1g02039 1 31764822 31765962 ECH