Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02020 ATGTCGTCGTTACTAGTAGATTTGCTCCGCCAAAGAGGCGGCACCGCCGTCATCGACGGCGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGCGCCAAATGCCTCTTTTCCTCTCCTCACCTCATTCGCCAGGTGCACCTTGATTACCTAGAAAATGGCGCTGACATTATAATCACAGCATCTTATCAAGCCACCATTCAAGGTTTTAAAGACAAAGGCTATACTGATGAAGAGAGTGAAGCCATGCTCAAAAGAAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTATTATAAAGGATGTTCTGAATGCTGTTCGGGTGATGGGGCTGAGGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTACAGTGGTCATTATGGTGATGCTATCACGAAGACAAAACTAAAAGATTTTCATCGTAGAAGAGTTCAAATCTTAGCAGATTCAGGTGCTGATCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGGCTTTTGCTGAGCTTCTGGAAGAAGAGGACATAAAAATTCCAGCATGGTTTGCTTTTAACTCTAAGGATGGAGTTAATGTTGTTAGCGGTGATTCCCTTTTGGAATGTGGCTCTATTGCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATTAACTGTACCGCACCTAGATTTATACATGATCTGATTGTTTTGCTGAAAAAGGTGACAACAAAACCAGTTGTAATATATCCTAACAGTGGGGAAACTTATGATGCTGAATTGAAACAGTGGGTGCAAAACACTGGTGTTACAGATGAACACTTAATCTCATATGTTACTAAATGGCTTGAGGTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAGTGTACTGTCTAGAGGTAAATCTGCTATTGTTGGCAAAGAGTGA 1014 0.4408 MSSLLVDLLRQRGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKDKGYTDEESEAMLKRSVEIAREARELYYKGCSECCSGDGAEGKILKQRPILIAASVGSYGAYLADGSEYSGHYGDAITKTKLKDFHRRRVQILADSGADLLAFETVPNKLEAEAFAELLEEEDIKIPAWFAFNSKDGVNVVSGDSLLECGSIAESCNKVVAVGINCTAPRFIHDLIVLLKKVTTKPVVIYPNSGETYDAELKQWVQNTGVTDEHLISYVTKWLEVGASLVGGCCRTTPATIRKIYSVLSRGKSAIVGKE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02020 337 ProSiteProfiles Homocysteine-binding domain profile. 4 326 IPR003726 -
Viun1g02020 337 FunFam Homocysteine S-methyltransferase 5 325 - -
Viun1g02020 337 PANTHER ZGC:172121 9 328 - -
Viun1g02020 337 SUPERFAMILY Homocysteine S-methyltransferase 9 328 IPR036589 -
Viun1g02020 337 PIRSF BHMT 5 205 IPR017226 GO:0008168|GO:0008270|GO:0009086
Viun1g02020 337 PIRSF BHMT 274 334 IPR017226 GO:0008168|GO:0008270|GO:0009086
Viun1g02020 337 Gene3D - 6 324 IPR036589 -
Viun1g02020 337 Pfam Homocysteine S-methyltransferase 17 324 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02020 Viun-Chr1 31619107 31624564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02020 K00547 - gmx:100790567 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02020 1 31619107 31624564 Viun1g02020 1 31619107 31624564 ECH