Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02010 ATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCACGGGTACCTTTCTACCTTCACCCGGTGTTAGAGCGTGTCTCTCGATCTTGGCAAGCAGCTATTCGAAGCTCTGAACTATTTAGAGCTCGGCAGGAGGTTGGTTCAACTGAGGATCTGTTATGTGTCTGTGCTTATGATCCAGAGAACTTATGGCAGCTGTATGATCCTTTGCGAGATCTCTGGATCAGACTTCCTGTTCTTCCATCAAAGATCAGGCACCTTTCCCACTTTGGTGCAGTTTCCACTGCTGGAAAGTTATTCGTGATTGGTGGTGGAAGTGATGCTGTTGATCCTTTGACAGGGGACCAAGATGGTTGTTTCGCAACAGATGAAGTCTGGTCATATGACCCTGTGGTTCGACAGTGGGCCCCTCGGGCACCAATGCTTGTCCCACGTTCTATGTTTGCATGCTGTGTTTTGGACGGGAAAATTGTTGTAGCCGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGAGAAGGATGTCTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCGGCCTGTTCAGGAGTAGTGATCGGGGGAAAGGTGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCTGGGTGGATTGTTGAGGAATGTGGATGGCTTCAAGGTCCGATGGCAGTTGTCCGTGATGCGCTCTATGTGATGACCAATGGATTTATCCTCAAACAGGACAAAGAAGTGAGAAAGGTTGTGGGTTCAGCATCTGAGTTTCGAAAGAGAATTGGATTTGCAATGGCGGGACTAGGTGATGAGTTATACGTGATTGGAGGCTTCATTGGCCCTGATAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAATGAGAGACCAACTTGGCGTCAAGCGGCTCCAATGACTTGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4721 MSGLIEGLPDAVAIRCLARVPFYLHPVLERVSRSWQAAIRSSELFRARQEVGSTEDLLCVCAYDPENLWQLYDPLRDLWIRLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRAPMLVPRSMFACCVLDGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECGWLQGPMAVVRDALYVMTNGFILKQDKEVRKVVGSASEFRKRIGFAMAGLGDELYVIGGFIGPDRWNWDIKPLSEVDVLTLGNERPTWRQAAPMTWCHGTILGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02010 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Viun1g02010 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Viun1g02010 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Viun1g02010 345 Pfam Kelch motif 278 330 IPR006652 GO:0005515
Viun1g02010 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Viun1g02010 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Viun1g02010 345 SUPERFAMILY Kelch motif 61 331 IPR015915 GO:0005515
Viun1g02010 345 Gene3D - 60 341 IPR015915 GO:0005515
Viun1g02010 345 CDD F-box_AtAFR-like 4 48 - -
Viun1g02010 345 PANTHER OS02G0202900 PROTEIN 3 264 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02010 Viun-Chr1 31576092 31580181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02010 8 188 Miscellaneous Gene Families AT4G33900 29.474 1.26e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02010 - - gmx:100800954 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02010 1 31576092 31580181 Viun1g02010 1 31576092 31580181 ECH