Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02008 ATGCTGCTGAGGAACAGATCAAGAGCAGTGAGCAAGCCAGGTTTGATGGCTGATCATAGCTCTCAGCAATCCCCCACTCAAAACTATGCTAAAACTATTCCCTCTCTATTTGGGTCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCTTCAGGAACCGAGGCCTTAAGGAGCCCAACTTCAATTCTTGATGCCAGAGCATTATCCCCTTTTGCCTTTGCAAATCCATTCTCAACTCCTCCAAACAAAACCTCCCCACCAAGCAGAACATCCTGGGACAAGCCTGATTCAAAGGGTCTTGCTCTTGCTCTTGTTGGTGCTTTCAAAGATGACGATAACCCAATTCATGACAGTTCTGAGACCAACAAAGGAAACGTTCTGCTTAGAGTGAAAATCCCATTTGAGTCTCAGACATGTGGTGATGATTTTGGAAGCAAGCCCAAGGATTCAAAAAACTCATCTGGGTCAGAAAGTTTTGCAAAGGATGATTGCGTTTCAACTAGTGTGAGGGCTCTGTCTTGGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAACCCAAAAACCACACACATATTCAATAATTGCATTGTGGTGGAGACCTATTATTCTCTCCCCCAAAACCAAAACTCTCATTCTGCTACCTCCGCAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAACATCTTGACCAGACCAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGGAGTGCCGCCACCAAGAAATGGTGCTGGATGGAATAGAAAATTTAGAGTTTGAAAGCAATGGCTTTTCTTGA 837 0.4373 MLLRNRSRAVSKPGLMADHSSQQSPTQNYAKTIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPFAFANPFSTPPNKTSPPSRTSWDKPDSKGLALALVGAFKDDDNPIHDSSETNKGNVLLRVKIPFESQTCGDDFGSKPKDSKNSSGSESFAKDDCVSTSVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQNQNSHSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLEFESNGFS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02008 278 MobiDBLite consensus disorder prediction 75 96 - -
Viun1g02008 278 ProSiteProfiles Zinc finger FLZ-type profile. 225 269 IPR007650 -
Viun1g02008 278 PANTHER FCS-LIKE ZINC FINGER 8 3 269 IPR044593 -
Viun1g02008 278 MobiDBLite consensus disorder prediction 76 93 - -
Viun1g02008 278 Pfam zinc-finger of the FCS-type, C2-C2 217 265 IPR007650 -
Viun1g02008 278 MobiDBLite consensus disorder prediction 1 27 - -
Viun1g02008 278 MobiDBLite consensus disorder prediction 140 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02008 Viun-Chr1 31556674 31558932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02008 - - gmx:100788456 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02008 1 31556674 31558932 Viun1g02008 1 31556674 31558932 ECH
Viun1g02008 1 31556674 31558932 Viun7g01559 7 20107397 20109235 PCT