Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02003 ATGAAGGAGTTTCCTTCTTGCTTTGGAGAAAATGGTGTTCAGGTTGTAGATTCCTCCTATTCAAGTACAACAAGGGGAGCTCAAAATGTTGTTACTTGTGTCTATCAGTGTAAGTTAGGAGGCCGTTCATTCTTGATTACTGTCTCCTGGACCAAATATTTGATGGGACAAGGCTTGAGTGTGGGAATCGATGAATTGGGTAATCATTGTCTCTGCAAGGTTGATATAAAGCCATGGTTGTTCTCAAAGAGAAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAGCAAAATCGATATACTTTGGGATTTGAGCTGTGCTAAATTTGGTTCCGGGCCTGAACCGTTGGAGGGATTTTACTTGGTTGTTGTGTTCAACCAAGAGATGGTCTTACTCCTCGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGATGGTGACTATGCTTGTGCTAACTCGGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGGAAGAAGTTTTACGGTGCAAAGGCTCAGTTTTGTGACAAGGGCCAAGTGCATGATGTGAGAATTGAGTGTGACACACTTGGGCTTAATGATCCATGCCTTGTGATCCGAATTGATAGCAAGACGGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTCCGGGGAAATCACACTATTTTGGTGGATGGTGTAGCAGTGGAAGTGTTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTCTGGGAAATGCGGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGATGTTCGCAAACCAATCTGTTTCTGATCCTTCTGTTCTCACATGGGCTTACTCTCAGCAGTTCAGGGATTCCCAGTTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAGAAATGAGTAA 906 0.4283 MKEFPSCFGENGVQVVDSSYSSTTRGAQNVVTCVYQCKLGGRSFLITVSWTKYLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESSKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLKKEACKKIDGDYACANSEAVFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGVAVEVFWDVHNWLFGNALGNAVFMFQTCISTEKMFANQSVSDPSVLTWAYSQQFRDSQLQGLGFSLILYAWRNE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02003 301 PANTHER EXPRESSED PROTEIN 4 299 IPR008586 -
Viun1g02003 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02003 Viun-Chr1 31355617 31357112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02003 1 301 EF-hand Containing Proteins AT3G04860 57.566 1.10e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02003 - - gmx:100786850 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02003 1 31355617 31357112 Viun1g02003 1 31355617 31357112 ECH
Viun1g02003 1 31355617 31357112 Viun7g01573 7 20297841 20299131 PCT