Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01999 ATGGATTCCGTTGTCCTTCACAGTGTGAGTGCGTCATCAGCGGCGTCGTCGTCGTCTACGCCCTCAATGGCGAAGCGTCCATGTCCGTCGCAAAACCCTAGAGTGGAGAACCTGAGCGATGTGGAGCGTCTTCTGGACGCGTTTCTCTCCCTCTCCGACCTCCCTTCTCTCGCCCTCGATCTCTCCTTCGAGAGGCTTCTCCAATCGGTCCCCTCCGACCCCGATCTTATCGATCGCGCTCTTAAAATGGGTTCTCTCCTCCTTGACGCCGCCAAACACTCCTCTCGGAAACGCGCTTCCAACCACAATTCCCTCGCCTGGCCCCTCCCTCCGGACCTCACCATCAAGGTGTTCTCAATGCTTGATACCCAGAGCCTGTGCTATGCATCAGCTACTTGTTCAATGTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATACAAATCTTGATTTGACAACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCTACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGTGTTGTCCCTGGCGCTACTACTTCACTTGGATCTTGTCCACCATTTGTTTGTACCATAAGAAATGCTATTGTAGAAGTATCAAACTTTTCATGGAATGATAAGAGATCTCGACAAGGGAGGGAGTCATCCATTCTAACAAGGTGTTGCTTAAGCCCTTTAAGTGGTGATGGTGGTGCCCCAGGGGCTCTTTTAAGAAAGTTACACTTGTATAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCTGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCACTTGATAGAGCGCTTGTTTTTCGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACATGATTGCAAAGTTCGTGTATTGGTTAAGGGATTTAGGAAATTGAAGTATGTTGACTTTTCAACGTCTTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGGGGAAATTTTCTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCGAGGCTGTTGACTGCAATTCTTGCTGGAGATTTCAAATTTCTTGTACATCTTGATATATCCAATAGGGAAGGTTTAGCATCTGAGGCTGATTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAACGAGACCTGATATGTGTGTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTATATGGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTGCCCTCACAATTGAGTAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTACGTGATATACGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1593 0.4476 MDSVVLHSVSASSAASSSSTPSMAKRPCPSQNPRVENLSDVERLLDAFLSLSDLPSLALDLSFERLLQSVPSDPDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSMFSKCAKDPLCYTNLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNFLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLETRPDMCVVAEYPSAEGSYMETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01999 530 Gene3D Ribonuclease Inhibitor 103 425 IPR032675 -
Viun1g01999 530 MobiDBLite consensus disorder prediction 492 511 - -
Viun1g01999 530 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 108 397 - -
Viun1g01999 530 SUPERFAMILY RNI-like 239 424 - -
Viun1g01999 530 MobiDBLite consensus disorder prediction 1 34 - -
Viun1g01999 530 SUPERFAMILY F-box domain 96 154 IPR036047 GO:0005515
Viun1g01999 530 MobiDBLite consensus disorder prediction 492 510 - -
Viun1g01999 530 FunFam F-box protein isoform A 102 403 - -
Viun1g01999 530 Pfam F-box-like 109 151 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01999 Viun-Chr1 31339601 31347007 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01999 K10268 - gmx:100786317 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01999 1 31339601 31347007 Viun1g01999 1 31339601 31347007 ECH