Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01993 ATGAAGTTAATCTATTTAGCAGAAATTGTTACTGAAGTGTCTCAGGGTAATATCTGGAAGGATGATAATGTAGACGAGGAGATACAGAAGAAAATAAAAATAGTAAAATTAATATTGGATTCGAAGGAAGATGGAGAAATAACAGTATCAGCATATGACACGGCATGGGTTGGTCTAGTGAAAAAAAATGTTGGGGACACGAATTCTCCTCAGTTCCCTTCCTGTCTTGAATGGATTGCGAATAATCAGCTGCATGATGGTTCCTGGGGAGATGCTCAATTATTCATTGCCCATGATCGTATTCTTAACACTTTAGCTTGTGTGGTAGCATTAAGATCATGGAACATGCACCCTCAAAAGTGTGAGAAGGGAATGCAGTTTTTTAAGGAGAATCTGTGCAAGCTTCAGGATGAAAACCCAGAACACATGCCAATCGGGTTTGAAGTTACTTTCCCTTCTCTTCTCGATTTAGCTAGAATTTTGGATGTTGAAGTGCCAGATGATTCCCCTATCTTGAAAAACATCCTTGCAATGAGAGACCTGAAGCTTAAAAAAATACCAAGAGAGATTCTGCACAAAGTGCCTACAACACTGCTCCATAGTTTGGAGGGAATGCAAAATTTGGACTGGAAACAGCTACTGAAGTTGCAGTGCCAAGATGGGTCATTCTTATTCTCTCCATCCTCCACAGCTTATGCTCTCATACAAACTAAGGATGAAAATGCTCACAAATACCTGGATAAAACACTCCACAAGTTCAATGGGGGAGTTCCTAATGTCTATCCGGTGGATTTGTTTGAACACACATGGATCTTCGATAGACTTGATCGTCTTGGAATTTCAAGATATTTTAAGTCAGAAATCAAAGACTGCGTGACCTATGTTTCAAGATATTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTCAGACTACTAAGGTTGCATGGCCACCAAGTTTCAGCCAGTGTGTTTGAGAACTTCAAGAAAAATGGCGAATTCTTCTGTTTTTCTGGGCAGTCAAACCAAGCTGTGACAGGGATGTTCAATCTCTATCGAGCATCTCAAGTGCTGTTTCAAGGAGAGGAGATTCTTGAGGATGCCAAGAACTTCTCAGTCAAATTTTTAACTGAGAAACGTGAAGCAAATCAGCTCCTAGATAAATGGATCATAACAAAAGATTTACCTGGTGAGGTGAATTATGCTCTGGACATGCCCTGGTATGCTAGTTTGCCAAGAGTGGAAACAAGATTTTACCTTGAACAATATGGTGGTAGCAGTGACGTTTGGATTGGCAAGACCCTTTATAGGATGCCCTTCGTGAACAATGATGTTTATCTGGAGCTTGCAAAATTGGACTACAGCATCTGTCAAGCAGTGCATTGTGCAGAATGGGAAAAAATCCAAGGGTGGTACTCGGACGCAGGACTAGAGAGATTTGGATTGAGCAAACAGTGTCTACTATTTGCTTACTTTATAGCAGCAGCCAGCATATTTGAGCCTGAGAGATCTCGAGAGAGACTTGCATGGGCTAAAACTGCAGCATTGCTCCAGACACTTGGGTCCTTCATAAAGGATCAACAAACTACAAATGTTTTTGTAGATTTGTTCAACAACAGCATAAACGGACGAAACTTCTCCAACAAGAAGTTGAACAAGAACAAGAGAGAGGAAGAACTCCTGAAGATTTTACTGGCAAACCTTGATTACCTTGGGTTCGAAGTGCTTCGGAGCCATGGTCGTGAATTATCCCATTATTTGAATCAAGCATGGCAGGGTTGGTTATCAAGTTGGCAGAATGAAGGGAACAGTTTGGGAAGAGAAGCTGAGCTGATTGTGCAAATCATAAATGTAATGGGTGGCTATTGGTCAGAAGAACTACAGCTCAATCCACAGTACCAGAGGTTGGTCCAAACCACTAATAGAGTCTGCCATGGACTCCGTAATTATAAAAGCAGCAAGGCACATGATAGTGGCAGAGACAAGAGGATAACATGCATGACTACCCCTCAAATAGAATCAGACATGCGAGAACTTGTGCAATTGGTGCTCCAAAATTCTTCAGATGGGGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTCTACTACGGAGCATATTGTGATCCAGAGACCATAAACTCTCACATTCAGAAAGTGCTCTTTGAAAAAGTTATGTAA 2229 0.4141 MKLIYLAEIVTEVSQGNIWKDDNVDEEIQKKIKIVKLILDSKEDGEITVSAYDTAWVGLVKKNVGDTNSPQFPSCLEWIANNQLHDGSWGDAQLFIAHDRILNTLACVVALRSWNMHPQKCEKGMQFFKENLCKLQDENPEHMPIGFEVTFPSLLDLARILDVEVPDDSPILKNILAMRDLKLKKIPREILHKVPTTLLHSLEGMQNLDWKQLLKLQCQDGSFLFSPSSTAYALIQTKDENAHKYLDKTLHKFNGGVPNVYPVDLFEHTWIFDRLDRLGISRYFKSEIKDCVTYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSASVFENFKKNGEFFCFSGQSNQAVTGMFNLYRASQVLFQGEEILEDAKNFSVKFLTEKREANQLLDKWIITKDLPGEVNYALDMPWYASLPRVETRFYLEQYGGSSDVWIGKTLYRMPFVNNDVYLELAKLDYSICQAVHCAEWEKIQGWYSDAGLERFGLSKQCLLFAYFIAAASIFEPERSRERLAWAKTAALLQTLGSFIKDQQTTNVFVDLFNNSINGRNFSNKKLNKNKREEELLKILLANLDYLGFEVLRSHGRELSHYLNQAWQGWLSSWQNEGNSLGREAELIVQIINVMGGYWSEELQLNPQYQRLVQTTNRVCHGLRNYKSSKAHDSGRDKRITCMTTPQIESDMRELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYGAYCDPETINSHIQKVLFEKVM 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01993 742 FunFam Ent-copalyl diphosphate synthase, chloroplastic 242 466 - -
Viun1g01993 742 Pfam Terpene synthase family, metal binding domain 459 613 IPR005630 GO:0000287|GO:0010333|GO:0016829
Viun1g01993 742 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 25 740 - -
Viun1g01993 742 FunFam Ent-copalyl diphosphate synthase 51 264 - -
Viun1g01993 742 SFLD Terpene Cyclase Like 1 N-term 23 449 - -
Viun1g01993 742 Gene3D Farnesyl Diphosphate Synthase 469 742 IPR008949 -
Viun1g01993 742 Pfam Terpene synthase, N-terminal domain 209 415 IPR001906 GO:0010333|GO:0016829
Viun1g01993 742 SUPERFAMILY Terpenoid synthases 454 726 IPR008949 -
Viun1g01993 742 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 51 131 IPR008930 -
Viun1g01993 742 Gene3D - 35 466 IPR036965 GO:0010333|GO:0016829
Viun1g01993 742 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 220 439 IPR008930 -
Viun1g01993 742 Gene3D - 51 264 - -
Viun1g01993 742 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 23 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01993 Viun-Chr1 31255909 31260479 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01993 K04120 - gmx:100807519 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01993 1 31255909 31260479 Viun1g01993 1 31255909 31260479 ECH