Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01960 ATGCCGCCTAGTCGGAGAAAGAGCGGAAAAAAGGCGGCGGCGGCTGCCGCCGCTTGCAGTCAGTTTAAGGTCGGCGATCTCGTGCTTGCTAAGGTTAAGGGATTCCCTGTTTGGCCTGCGACGGTGGATGAGCCGCAGAAGTGGGGTTACGCTGCTGATCGGAAGAAAGTATTTGTCTACTTCTTTGGAACCCAACAAATAGCATTCTGTAATCCTACCGATGTAGAAGCATTTACTGAAGATAAGAAACAATCTCTTGCCAAACGTCCAGGAAGGGGTGCTGATTTTGCACGTGCAGTAAAGGAGATTATTGAAAGTTATGAAAAATCGAAGTGTGATAATCTAGATGATGACACTAGTTCTGATGGTGAAATTGGTATTGCAAATTTATCAAATCCACTTGATCCATCTGCAAACCTATGGTCAAAGGATGAGATCGAGGCTCCTTTGGCAATTAATTCACAAAAGGAATCTTCAAATTGTGTGATCGGCAGACCTGATGTAGTTTGTGCAGCTGAGGATGCTGTTGCATTGAGGAATGAGTCATATAATATAGAGGCATCATTGGATGAACCTACTGATAATGCTACTGTGACTGCAACTGTAAAATCACCTTTTCCAATTACCCTAAGAAATGAACCAGCTCGAAGGATTAGAAGCACATTACAGGTCCAAGACTTTGTTGTACCTTGTAGTGATGGTGAAAATTTCGGTGATGGCAATAGTGATGACTATGTATTAGCTGATGCAATTCAGAAAATGGATATACGAAGGTGTAAACATACCAGGAAATCTCCTAGTCTTTTCGGTTGTGATGATACTAATTCACTTGCATTTGCCTCAAATCTTAGCATGGAGGACAATGGTTCTGAAATTATTACAATAAATTCTGATGGCTTTGCTTTAAATGAGGGAAGTACAATAGATTGTAATTTAAAACTTGAACAGTCTGAGCCTTTTGAATGCCCTGAAGGTGAAGATGATTTGAACAAAGGTCTTGATCTAGAAATAAAGACTGTAATCAGCAAGAAGAAAAGAAGACCAACTAGGAAGAAAGAAACTAATGATGCTGGTGCACTGAATGCCAGTCAAACTTTGCTGAATATGAGTGAAAATTCAAAAGAGAGATGCCCTGACCAAGATGGAGATGAACACTTGCCCTTGGTGAAACGAGCCAGAGTTAGAATGAATAAATCATCAACAGAGGCAGAACTTAATAGCACTGTAGAAGTCCTGGTGAAGAGTGGTGATGAAGATATTACTGACTCACCACATCAATTAATCACATCCTCAAATTGTGAAAATGGTAGCCATCCTGAAGTAGGTTCATCAGTCTTGAAAGAAGCTTTGGTTAATGTTTCTCCTAACTTAAAAGCTCCATCTTCAGAAAATGGTTCTCATATTTGTAAAATTAAGAAAGAGCAAATGATTGGCTTTTCTGTGAATGATGAAGCTGCTCTGCCTCCATCTAAACGTATTCATCGTGCTTTGGAAGCAATGTCTGCCAATGCTGCTGAAGATGGTCAAGCTTGCATGGAATCATCATCCTCTATGGTGGCATCACCTGGTAGGTGCTGTATATCTACTCTCGAGAAATGTCCTTGCATGACTGATAATAATGAAGGAGGTAATGGTTTAGAACTTCAAAGGTTGGATTCTTGTGACATTGATTCTTCCCATGTTAGTGTGTCTAGTTTCTCAGCTCGTTCAAATACAATTATTTCCATAGAGAACGGGTCATCTATAGAATTGGATGAGCAGTTGGCCAAGTACGAAAATGAAATTGGAAAGGATGCCATCCCTTGTGATAGACAGCAAGTTGGTGAAGATCTTATTGATTCTGTTGTTTGTTTTCCTTCCAAAATAGTTTCTCAAATTGAGTTACATGGCAAAATTTCTCCTAATCCTGATATGAAATGTTGTCAAGTTGGAAGCAATCAAGATTCACCAGGTCCATCCTTGTTACCAAACGGTGATGTCAACATCAGGCCTTTGAACCATTCAGATGCATCAAATACATTAGAGCATGGCGGAATAAGTCTTGATCCTGTGTTCAGGGCCAGTGAAAGTGATAAATTATTACCTCAAAACAGAAGTAACGTGCCCCAGAATGTGGTGGTTGGTTGTGAGGATGTGAAGCAAGTAGTTGGTGACAGCAAAAAAATTAATGACATGCATGAGGTTATTAAAGAAGTGAAATTTAAAGGACAAGAGGAGGATATGAATTCTGTCTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTAGGGATTGTGTCAAGCCCATCTTTGACTGATGGGAGAGTCTGCCTTCCACCAGGTTCACCTCCAAACACAACATCAGTCTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAAAAAAACACTTTATCGGTTCCTACTGATGGATGGAAAGATGGGATTGTGGCAAATGACCGATCAAGATCTGTGGGCAAGTCAACTGAAGCAGGAGATGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATTGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGGTTGAAATTCTTGTACGTAATCTGGAAATTGAGACGAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGATTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTGTATCCATCCACTATGAAAGCAGTGCTGCCACGTCTATTGTCTGCAGTTGCTCCTCCTGGAAATGCTGCAAAAGAAAATCGTCGTCAGTGTCTTAAGGTATTAAGGCTGTGGTTGGAGAGAAAAATCCTTCCTGAACCCATTATTCGGCATCATATGCGGGAAATAGACTCATATAGCACTTCAGCTTCTGCAGGTGTCTACTCACGCCGTTCATTAAGAAGAGACAGGCCTTTTGATGACCCTGTCAGAGACATGGAGGGCATGTTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTGAAGATGGAGGAAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTTACTCCTGAGCATGATTCTGAAACACATGAAGTGCAAGAAATGGCTCATGCAATTGAAAAACGCAGGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTCGCTCCCTCTGTTGATCTTGAATTAAATTCAAATTGTAATGTTGATAGAGTAAATGTCCCAGAGTTTGAGAAGAATCTTCACATGTCATTTGCTCCTCCTTTGCCACAAGATTTGCCACCGTCTTCCCCACCCCCACCTTCATCTCCACCACCTCCACCACCACCACCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTGTTCCTCTACCTGCACCCCCACCTACTGCACAGCTCACATCAGCTACCTCTGATCAATTTCATGTTGCAGTTGATTCAAAAGGTTTTGGAGATTCACTGACCGTGAAAGCCAATGTACTGCATCCTATGGCTCAGCCCTTTTCTGAACCAAGAAATGGTCAACCTGCCAGTGAGGCAATGCAGTATACTGTCCATGAATGTAGAGACAAGCCAATGCAGATGCAGTCGTCTACTTGCTCTTTGAACATTCGCCCTATACAATCAACTGACATTTCCAGGAACACTGATGGTGGTACTATGCATAATAAAGGTTACTCGATACCACCACCTCACCATGTGCCATCTAATCAGTTTTCTTTTGTTCATGGGGAACATCGTATGAAGTCTCAAAGGGAGGTTCTGCAACCCCTTCCATATTCCAATGATTACCATTTTGTGCCGAGTATGAAGAGAGAATTTGGTTATGAAAATCATGAGAGATTAAAACAACATTCATGTGATTACCAAGAGATATGGAATGGTCCTCCTTCTTATGGTCCTTGGTATCATGACAGAGGTGTGACTGCTCCTTATGGTTGTCATCCAAGTGAACCAGCCAGTTTTCCAGGTCATGAATGGAGATTTCCTCCCCCACCACTGAATTACAGGGACTCCTTGCATTTTAGACCTCACTATGAAGATGCAATTCCAGTAGCAAACCGAGAAAGCAAAGAGATAGAGAAAGTTGTGGAAAGAGTCTTCTCTCACTTTTCAGAAATGGGTGCTGCTGAATCAGTCTCGGAAAAATCCATCCATGAATTCTCGGTCAAGGATGCCAAGGGCAGAGACGTGAACCTCACCACCTACAAGGGGAAGGTTCTGCTTGTAGTTAACGTTGCTTCAAAATGTGGATTTACGAATTCCAATTACACCCAGTTAACTGAGCTTTACAGCACATACAAAGACAAAGGTTTTGAGATACTGGCATTTCCATGCAACCAGTTTTTGAAGCAAGAGCCGGGGAATAGCGAAGAGGCAGAGCAATTTGCCTGTACAAGGTACAAGGCTGAGTATCCCATTTTTGGAAAGATACGTGTCAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAATCAGGATTTTTGTGTTCTAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACAAGGAAGGGAAAGTCCTACAACGTTATGGTCCAACCACCTCACCACTGTCCATTGAAAAGGACATCAAGATGGCATTGGGGGAGGCATGA 4704 0.4203 MPPSRRKSGKKAAAAAAACSQFKVGDLVLAKVKGFPVWPATVDEPQKWGYAADRKKVFVYFFGTQQIAFCNPTDVEAFTEDKKQSLAKRPGRGADFARAVKEIIESYEKSKCDNLDDDTSSDGEIGIANLSNPLDPSANLWSKDEIEAPLAINSQKESSNCVIGRPDVVCAAEDAVALRNESYNIEASLDEPTDNATVTATVKSPFPITLRNEPARRIRSTLQVQDFVVPCSDGENFGDGNSDDYVLADAIQKMDIRRCKHTRKSPSLFGCDDTNSLAFASNLSMEDNGSEIITINSDGFALNEGSTIDCNLKLEQSEPFECPEGEDDLNKGLDLEIKTVISKKKRRPTRKKETNDAGALNASQTLLNMSENSKERCPDQDGDEHLPLVKRARVRMNKSSTEAELNSTVEVLVKSGDEDITDSPHQLITSSNCENGSHPEVGSSVLKEALVNVSPNLKAPSSENGSHICKIKKEQMIGFSVNDEAALPPSKRIHRALEAMSANAAEDGQACMESSSSMVASPGRCCISTLEKCPCMTDNNEGGNGLELQRLDSCDIDSSHVSVSSFSARSNTIISIENGSSIELDEQLAKYENEIGKDAIPCDRQQVGEDLIDSVVCFPSKIVSQIELHGKISPNPDMKCCQVGSNQDSPGPSLLPNGDVNIRPLNHSDASNTLEHGGISLDPVFRASESDKLLPQNRSNVPQNVVVGCEDVKQVVGDSKKINDMHEVIKEVKFKGQEEDMNSVSISNDYSGEKGNLGIVSSPSLTDGRVCLPPGSPPNTTSVCNISTSDSSNILQNGSCSPDVHQKNTLSVPTDGWKDGIVANDRSRSVGKSTEAGDAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIATKVVEILVRNLEIETSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSTMKAVLPRLLSAVAPPGNAAKENRRQCLKVLRLWLERKILPEPIIRHHMREIDSYSTSASAGVYSRRSLRRDRPFDDPVRDMEGMFDEYGSNSSFQLPGFCMPRMLEDGGSDSDGGEFEAVTPEHDSETHEVQEMAHAIEKRRHVLEDVDGELEMEDVAPSVDLELNSNCNVDRVNVPEFEKNLHMSFAPPLPQDLPPSSPPPPSSPPPPPPPPPPSPPPPPPPVPLPAPPPTAQLTSATSDQFHVAVDSKGFGDSLTVKANVLHPMAQPFSEPRNGQPASEAMQYTVHECRDKPMQMQSSTCSLNIRPIQSTDISRNTDGGTMHNKGYSIPPPHHVPSNQFSFVHGEHRMKSQREVLQPLPYSNDYHFVPSMKREFGYENHERLKQHSCDYQEIWNGPPSYGPWYHDRGVTAPYGCHPSEPASFPGHEWRFPPPPLNYRDSLHFRPHYEDAIPVANRESKEIEKVVERVFSHFSEMGAAESVSEKSIHEFSVKDAKGRDVNLTTYKGKVLLVVNVASKCGFTNSNYTQLTELYSTYKDKGFEILAFPCNQFLKQEPGNSEEAEQFACTRYKAEYPIFGKIRVNGPDTAPVYKFLKANKSGFLCSRIKWNFTKFLVDKEGKVLQRYGPTTSPLSIEKDIKMALGEA 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01960 1567 Pfam Glutathione peroxidase 1409 1517 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 SMART 558neu5 843 974 IPR006569 -
Viun1g01960 1567 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Viun1g01960 1567 FunFam Enhancer of ag-4 2 839 979 - -
Viun1g01960 1567 SUPERFAMILY Thioredoxin-like 1408 1565 IPR036249 -
Viun1g01960 1567 Gene3D - 3 108 - -
Viun1g01960 1567 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1077 - -
Viun1g01960 1567 SUPERFAMILY Tudor/PWWP/MBT 20 112 - -
Viun1g01960 1567 ProSitePatterns Glutathione peroxidases signature 2. 1466 1473 IPR029760 -
Viun1g01960 1567 ProSiteProfiles Glutathione peroxidase profile. 1399 1567 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 Pfam CID domain 844 966 IPR006569 -
Viun1g01960 1567 MobiDBLite consensus disorder prediction 1112 1154 - -
Viun1g01960 1567 ProSiteProfiles Thioredoxin domain profile. 1403 1565 IPR013766 -
Viun1g01960 1567 CDD PWWP_HULK 25 111 - -
Viun1g01960 1567 Gene3D Glutaredoxin 1400 1566 - -
Viun1g01960 1567 FunFam Glutathione peroxidase 1400 1566 - -
Viun1g01960 1567 ProSitePatterns Glutathione peroxidases active site. 1429 1444 IPR029759 -
Viun1g01960 1567 Pfam PWWP domain 25 107 IPR000313 -
Viun1g01960 1567 PRINTS Glutathione peroxidase family signature 1427 1444 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 PRINTS Glutathione peroxidase family signature 1528 1537 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 PRINTS Glutathione peroxidase family signature 1463 1479 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 Gene3D - 842 981 IPR008942 -
Viun1g01960 1567 SMART PWWP_4 22 79 IPR000313 -
Viun1g01960 1567 MobiDBLite consensus disorder prediction 1108 1160 - -
Viun1g01960 1567 CDD GSH_Peroxidase 1408 1560 IPR000889 GO:0004602|GO:0006979
Viun1g01960 1567 ProSiteProfiles CID domain profile. 836 977 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01960 Viun-Chr1 30936236 30957460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01960 - - pvu:PHAVU_001G148900g 1755.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01960 1 30936236 30957460 Viun1g01960 1 30936236 30957460 ECH
Viun1g01960 1 30936236 30957460 Viun7g01618 7 20880770 20899846 PCT