Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01923 ATGATGACAGACGAAGAACTGATGCAGAAACTTGAAGACTTAACTATCAACGCCCAACATCACCAGTTGGAGACTCTCCGTTCGATCCTTCTTCACAATGCCACCGTGCGATATCTTCAACCCTTCTTCAACAACTCTCCTCTTCCTCTTGATCACTCCACTTTCACACGTCTCGTGCCTCTCTCTTCCCATGGAGATTACGTTGACTACATTAACCTTATGGCAGACGGAAAAGATGACCCCTTTCTCTCCGTCGACCCTCTCCGCTGCTTCTTTTACAGTTCGGGAACAAGTTCGAGCACCATGAGACCGAAATTGATCCCTTACTTCGATTCGAGCCTTTGTAAAGCTGCCTCCTTTATCGGTCACCGAGGCAGTATTGCTGTTCTACAAAGGGTATTCCCTCCTAGACCTGAAGTGAACAAGATCCTATTCTTTCTCTATGCTGACAATACAACTACTACTAAATGTGGCTTGAAAGTCATGCCTGCTTCCACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAGCAACTTGCTACTTTTTCCAGTCCCCTAGAAGTGATTCTTGGATCTCATGTTGAGCATCAAATGTACTGCCACCTTCTATGTGGCCTTAGGAATCTTGATGTTATAGATGGAATCGCAACCCCTTATGCCATAGGTTTGATCAAAGCATTTGGTCTACTGGAGTCCAAGTGGGGGCAACTGTGTGATGATCTTGACCATGGATTTCCGTGTAATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTGACTAAGACACTTGGTGGACCTCAGCCAGATTTGGCAGATAGAATAAGATTAATCTGTGAAGGTAACAACTGGGGTGGAATTGTGTGTAGATTGTGGCCAAACAGTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAGCAATACTACCAAAAGCTCAAATACTATGCAGGGGAGGTACCTATTTTAGGAGGAGATTACTTAGCTTCTGAATGCTGTATTGGTTTAAATTTGGACATGATGCAGCCCCCTGAGACAACACGGTTTGTGATACTTCCAACTTTTGCCTACTTCGAGTTTCTTCCATTTGACATGAATGAGGACAATGTTAGCAAAGAAACAGTGGAACTTTGCAGTGTGGAGGTTGGGAAGATGTATGAAGTGGTTGTCACTACTTACAGAGGACTTTATCGCTACCGTTTGGGTGATATAGTGAGAGTTGTTGGTTTCCATAACTCATCTCCAGAAGTTGATTATGTGATGAGAGCACCTAAAAATCCTGCTGAGATTGTGACTGAGAAGGACTTGATTTCAGCTGTAGAGGATTTTCAACTTGCACTTAGAGATGCTATGAAAATTGAGATTGTTGAGTATGCAAGTTTCTTGGACCAGGGATCACTGCAGAAACAGTTGAAGGTATTTGTGGAAGTTCAAGATGAATCTAATTTTCTGGAGGATAAGCTAGAGGAATCAGTTAAAGTGTTTAGAAGTTGTATGTCCACTCTCGAGAGTGGTTTGGGAGCTATATACAAGGTGCAGAGGGATAAAGGTCAACTAAGAAACTTACTGTTGTTCATAGTAAGGCCTGGAGCTTTTGATCAATTATCAGACATAGCCATTCAGAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATTATAAGGAATCATGAAGTTGTCAAACTCTTGGAAAATTTAGCCATTGTGATAGTGTCGTTTGATGGTTAA 1728 0.4259 MMTDEELMQKLEDLTINAQHHQLETLRSILLHNATVRYLQPFFNNSPLPLDHSTFTRLVPLSSHGDYVDYINLMADGKDDPFLSVDPLRCFFYSSGTSSSTMRPKLIPYFDSSLCKAASFIGHRGSIAVLQRVFPPRPEVNKILFFLYADNTTTTKCGLKVMPASTYPLQSGNATPQQLATFSSPLEVILGSHVEHQMYCHLLCGLRNLDVIDGIATPYAIGLIKAFGLLESKWGQLCDDLDHGFPCNEISEGAMREAVTKTLGGPQPDLADRIRLICEGNNWGGIVCRLWPNSRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYLASECCIGLNLDMMQPPETTRFVILPTFAYFEFLPFDMNEDNVSKETVELCSVEVGKMYEVVVTTYRGLYRYRLGDIVRVVGFHNSSPEVDYVMRAPKNPAEIVTEKDLISAVEDFQLALRDAMKIEIVEYASFLDQGSLQKQLKVFVEVQDESNFLEDKLEESVKVFRSCMSTLESGLGAIYKVQRDKGQLRNLLLFIVRPGAFDQLSDIAIQNGTSASQYKPPKIIRNHEVVKLLENLAIVIVSFDG 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01923 575 Pfam GH3 auxin-responsive promoter 10 557 IPR004993 -
Viun1g01923 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 3 567 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01923 Viun-Chr1 30733079 30735933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01923 8 564 EF-hand Containing Proteins AT1G23160 33.158 6.33e-95 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01923 K14487 - gmx:100786829 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01923 1 30733079 30735933 Viun1g01923 1 30733079 30735933 ECH