Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01898 ATGGCCAACTCCACCATTTTCTTTTGCCTTAACCTCTCTTTACTCATCACTCTCGTCACCGCCACTTACTATCAAAGTCTCACACCAACGCTCATGGGTTTCCGTGAGGACAAGTTCACCCACCTTCACTTCTTCTTCCACGACGTAGTCACCGGGCCCAACCCCAGCATGGTCATTGTCGCCGAGCCCAACGGAAAGGCCAAGGACGCCCTTCCCTTCGGCACCGTTGTCGCCATGGACGACCCCTTGACGGCGGGACCCGAACCCGACTCCAAACTCGTGGGGAAGGCCCAGGGGATTTACACTTCCATATCTCAGGCGGAGATGGGGCTCATGATGGTCATGACCATGGCCTTCACCGACGGAGACTTCAACGGCAGCACCATCAGCGTGTTGGCCAGAAACATGATAATGAGCGAACCTGTTAGGGAAATGGCCATCGTTGGCGGCACCGGCGCTTTTCGCTTCGCTCGTGGCTACGCTCAGGCCAGGTTCCACTCCGTCGATTTCTCCAAAGGCGATGCCATCGTCGAATACGACGTCTTCGTCAATCATTATTGA 561 0.5561 MANSTIFFCLNLSLLITLVTATYYQSLTPTLMGFREDKFTHLHFFFHDVVTGPNPSMVIVAEPNGKAKDALPFGTVVAMDDPLTAGPEPDSKLVGKAQGIYTSISQAEMGLMMVMTMAFTDGDFNGSTISVLARNMIMSEPVREMAIVGGTGAFRFARGYAQARFHSVDFSKGDAIVEYDVFVNHY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01898 186 Gene3D - 32 173 IPR044859 -
Viun1g01898 186 PANTHER NUCLEOPORIN-RELATED 19 182 IPR004265 -
Viun1g01898 186 Pfam Dirigent-like protein 40 183 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01898 Viun-Chr1 30521465 30522295 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01898 - K25075 gmx:100500621 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01898 1 30521465 30522295 Viun1g01898 1 30521465 30522295 ECH