Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01892 ATGTCTGGGAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACACGCTTACATTCATTATCCACCACTTCGGTGCAATGTTCCTGGATCTAGTGGATTATTTTATGATGATGGAAATAAGTTGATACTCTCTCCAACAGTTGACCAGGTATTTTCATGGAAAGTTGGTCCCTTTGATCCTCTAATTGATCCAACCGCTGACTCAATAAGTGAAGGCCCTATTATAGCTATTCGATATTCTTTAGACACAAAGGTAATAGCAGTCCAGCGATCAAACCATGAGATGCAGTTTTGGGATAGAGAGACTGGGGGTACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGGTTTTTTTGGACAGATAGTCACCAGTGTGATATCGTTCTTGTTAAGACAAGTGGTCTAGACTTGTATGCTTATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTCAGTTGGTATGTTTACACCCATGAAAGTCGCTTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGCTTTCAGATTTCATCTGCAGATATTGTTCGTTTGCCAAGATTTGAGATGGCTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGATGTCTTTATTGTTACTGTTTATGGTAGGATATACTGCTTACAAGTTGATAGAGTTGCTATGCTGCTTCATTCTTATCGGCTATATCGTGATGCAGTAATACAGCAGGGCTCTTTTCCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCACGAGCACCAATATCTGCACCACTTCCTTTATTATTTAGGGGATTCCCCAGATCCAGTACTTCATCTCAATCTAGTGGCAGAGACAGTGAGAGTTCTGACAGTAATGTTTTGAGTAATCATGGAGCAGTTACATACTCCAATGCATGGACTTTCCTAGTGCCTGACCTTGTATGCGATGTGGCCAATAAGTTATTATGGAAGTTTAATTTAGACATAGAGGCAATTTCTGCCAGTAGCTCAGAGGTCCCATCTGTATTAGAGTTCCTGCAGCGGCGGAGGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATTACACGTACACTCATTCTAGAGCACAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCAGCTCATACTCCCATTCAATTAAAACTGGTAACTATCTCAAGGGAGTGAAACCAGAAAAGGCATCAACTTCTGTTGATCAAAATTCTGGTGCTGAGGTATCTGCTATCGAAAGAGATTTAATTGGAAAATCAATCATTCATGAGTCTATGGAAAGAGTCGACAGTGGATCTCTTAATAAAGCTTCGGCTGTTTCAAGTATGGATTCTGATAATGAGTCTCAGTCTACAAATCCAAAACACAATTCAAAGGATGCCCACAGTGCTTATGATATGCAATCATCTCTTCAATCTGGGCAAGAGGAATCCCAACTTACTTCTGCGGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTCGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATACGTGTACTCCCAAATGTGTATGTATTAATTATTCAGCTTCTGGCTCGCAATGAACGTTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCATCTAAGGAAGTCGCACTGCAACTCCTAGAGTCTGGTCGCCAGAATGCTCAAACTAGGAAGCTTGGTCTTGATATGCTGAGACAATTAGGTTTACATCATGATTATGTTTTGCTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTGAGATATGCACGGAAAAACAGGAATTATTTTCAGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAACGACTCTCAACACCTTGCTGCGGTTCTAAGGTTCTTTACAGATTTTCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATACTGCCGTATACTCAATGAAATGAACTCATCCATGACTGTTTGA 2184 0.4103 MSGKASTSKPNIGLSGSDGLSHAYIHYPPLRCNVPGSSGLFYDDGNKLILSPTVDQVFSWKVGPFDPLIDPTADSISEGPIIAIRYSLDTKVIAVQRSNHEMQFWDRETGGTFSHKCRPESESILGFFWTDSHQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMAMAKSEANSKPVLAAEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSFPIYSNRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLFRGFPRSSTSSQSSGRDSESSDSNVLSNHGAVTYSNAWTFLVPDLVCDVANKLLWKFNLDIEAISASSSEVPSVLEFLQRRRLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVSSYSHSIKTGNYLKGVKPEKASTSVDQNSGAEVSAIERDLIGKSIIHESMERVDSGSLNKASAVSSMDSDNESQSTNPKHNSKDAHSAYDMQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARNERYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKNRNYFQVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCRILNEMNSSMTV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01892 727 MobiDBLite consensus disorder prediction 479 532 - -
Viun1g01892 727 MobiDBLite consensus disorder prediction 513 532 - -
Viun1g01892 727 Pfam Colon cancer-associated protein Mic1-like 556 700 IPR009755 -
Viun1g01892 727 MobiDBLite consensus disorder prediction 481 502 - -
Viun1g01892 727 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 722 IPR040371 GO:0010506|GO:0035658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01892 Viun-Chr1 30422807 30434317 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01892 K24763 - gmx:100500389 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01892 1 30422807 30434317 Viun1g01892 1 30422807 30434317 ECH