Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01876 ATGATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAGCTAGTTCACCGCTTGCTCTCCCAAAACCTCCCATCCAATTCCCCGCCGCTAAACCCTAACTCCGCCGAATTCCGCAACTCTCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGTCTCACTCCCTCCGTCGCTCCGGACGCGGCAGCCATCGCCGACTCCATCAAGCGCCGCCTCGCCACTCACGCTCGTTCCGCGGACGCCCTCTCATTTGCCGACCTCTTCTCCAAATTCGCCTCCAAAGCCCAAAGCGTCAACAACAAATGGGCTGTCATCTACCTCCTAAAAATCATCTCCGAAGATCGCCACAAGACCGCCTCCATCCCCGCCACCACGACACCTCTATTGCCCAACCTCGCTTTCTCCGAACCCGCTTCGAACAAGGGCTGGAGCAACGGCGTTTTACTTGTCTCCAAGGATCCCGAGAACCGCCGCGAAGTCGCGTTTCGGGAGTTCGTGAATTTGGTCAAGGAAGAAAACGAGGTGTCGGAAGAGGTTATCGTCAGGGACGTACTCTATGCTTGCCAGGGGGTCGATGGTAGGTTTGTGAATTTCGAGAGTGAGAGTAAGCGTTATGTGATACCCGATTCGGTTAGGGTTCCGAGAGGCACTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGTTTTGTTTCGGAAGGTTAGTGGTTACATTTCGCAGAGTATGGATCGGTTTCCCAATGAAGACGTGGGAACTGTTGGGCAAGCTTTTTGTTCCGCTTTGCAGGATGAGCTTAGTGAGTACTATAAGTTGTTGGCGGTTCTTGAGGCTCAGGCTTCGAACCCGATTCCTTTGGTGTCCGAATCTGCGAGTTCTGGGAACTATCTATCGCTGAGGAGATTAGCGGTTTGGTTGGCTGAGCCAATGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAATGTAGGGTTTTGCGCGGCGGGGCTATGGCGGGGGCGATTCATTTGCACGCACAGCATGGTGATCCGATGGTTCATGAGTTTATGAGGAGGTTGTTGCAGAGGGTGTGTTCTTCACTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAGGATATATTTTCTGAGTTTTTCATTGTTGGGCAGCCTGTTAAAGCTGAGTCACTTTGGAGAGAAGGGTATAGGCTTCATGATGCAATGCTTCCTTCGTTCATTCCGCCTTCACTTGCGCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGATCGCGGTTGGGCGGATGCTGCGACTGAGGTTATCACTGATAATGAAGTGACAGCAAGAAGAGGTGGTTTTGGGTATGGGGAAACCGATACACTTGAGTTATTGGTAGATAAAGCTGCAAAAAGGATTGACAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAATATTTGTTGCTTGGCCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTGGGACCTGAGCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTAGGGCATCTAATGCTCAGTATGAGGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCGCATGAAAGCGGTGATAGAGGCTGGGATGTATTTTCGTTGGAATATGATGCAAGGGTTCCACTTGATACGGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTTTGGAAGCTTAAAAGAGTGGAACATGCGCTTACTGGTGCCTGGAAGACCATGAAACCAAACTGCATTACTTCTAATTCGTTTACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCAACATTGAGACGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACATACAATATTATATAATGTTTGAAGTGTTGGAGATATCATGGTCAAATTTTTTGGCGGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGAGAAATATCTGCATTCTATTGTAGAGAAATCTCTCCTTGGAGACCTTTCCCAGTCTCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTCCGGAGCCGTGCAGATAGATTGTATGAAGGTATCCATGAGTTACAAGCAAGAATCACTGAATCCTCCCTATCCTCTCGAGACCAGAATAAAACACGATCACGAAAGCAATTGAATGATAAAACTGAAGAGCCAGGATCCTGGATTGTTGATGGGAGAAAAGCACTAACACAACGTGCTGGTGAATTTCTACGAAATATGGAGCAAGACCTTGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGAATTCATCTCTCAGTTGCCTATACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGCTGTGTCCTAGCGTGTAG 2538 0.4649 MMEEEEDQQKLPDLVKELVHRLLSQNLPSNSPPLNPNSAEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHARSADALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHKTASIPATTTPLLPNLAFSEPASNKGWSNGVLLVSKDPENRREVAFREFVNLVKEENEVSEEVIVRDVLYACQGVDGRFVNFESESKRYVIPDSVRVPRGTRSMVHNLCELGVLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPMVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFSEFFIVGQPVKAESLWREGYRLHDAMLPSFIPPSLAQRILRTGKSINFLRVCCEDRGWADAATEVITDNEVTARRGGFGYGETDTLELLVDKAAKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYEDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNIQYYIMFEVLEISWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQARITESSLSSRDQNKTRSRKQLNDKTEEPGSWIVDGRKALTQRAGEFLRNMEQDLDAIAKEYSSLQEEFISQLPIQQHVDLKFLFFRLDFNEFYRRLCPSV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01876 845 Gene3D - 492 837 IPR042241 -
Viun1g01876 845 Pfam Gamma tubulin complex component N-terminal 184 487 IPR041470 -
Viun1g01876 845 MobiDBLite consensus disorder prediction 756 773 - -
Viun1g01876 845 Coils Coil 261 281 - -
Viun1g01876 845 Pfam Gamma tubulin complex component C-terminal 493 838 IPR040457 GO:0043015
Viun1g01876 845 MobiDBLite consensus disorder prediction 754 773 - -
Viun1g01876 845 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 838 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Viun1g01876 845 Coils Coil 792 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01876 Viun-Chr1 30323840 30329230 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01876 K16570 - gmx:100784710 1528.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01876 1 30323840 30329230 Viun1g01876 1 30323840 30329230 ECH