Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01872 ATGTCTGTGATTGGGGCGTGTTCACAGTTCGTGTACGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGTTTGGTGAGTGGGAAAGGGTATTTGTTTTGTCACAGAAGTGGTGGGTATGAGAACATATGGGTTGGAAACAGAAAGAGAGAAAAGAAGATGAAAAGGAGAAATTTTCGCGTGGAAGCGATGTGGCCTGATTTGTCAAGACCAAGTGAAGTTGAGATGGAAGAAATCACTGATTCCGACCACCTTGATCGAATTCTTCTTCTTGCTCATGAAAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCAGCTGAATATCTCAACAAAGCCAAATTTTATTACGTGGATGTGAATAAAGTACCCCAGACTCTAGTGAAGAGAGGCAACATATCTCTGTGGAAAGATGGAGAGATGAAGGCAGAAGTGATTGGAGGCCATAAGGCTTGGCTAGTTACTGAAGAAGTCAGAGAAATGATCCAAAAATTCTTATGA 552 0.4203 MSVIGACSQFVYGEVYQRDEQWAQCLVSGKGYLFCHRSGGYENIWVGNRKREKKMKRRNFRVEAMWPDLSRPSEVEMEEITDSDHLDRILLLAHENSQPILIDWMATWCRKCIYLKPKLEKLAAEYLNKAKFYYVDVNKVPQTLVKRGNISLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01872 183 CDD TRX_family 95 180 - -
Viun1g01872 183 ProSiteProfiles Thioredoxin domain profile. 60 183 IPR013766 -
Viun1g01872 183 FunFam Thioredoxin 73 183 - -
Viun1g01872 183 Pfam Thioredoxin 95 166 IPR013766 -
Viun1g01872 183 SUPERFAMILY Thioredoxin-like 74 179 IPR036249 -
Viun1g01872 183 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 48 182 IPR044253 GO:0009570
Viun1g01872 183 Gene3D Glutaredoxin 67 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01872 Viun-Chr1 30311977 30313322 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01872 - - gmx:100811965 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01872 1 30311977 30313322 Viun1g01872 1 30311977 30313322 ECH