Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01856 ATGAGGATCCGGAAAAGGCCGGTGCTTTTCCCGTCGTCGGTCTCGCCGTTGCCTCTGTCAGATCCACACCTGATCAGCCGGTCGCCGGTGGTGGTGCAACTAAGCGAGGCTGCTTCCACGGCAGCGAAACATTCTTCTTCTGCAGTGCTCCATCGCCATGCTGCTTCGTGGAGCTTGGATCGTTGCCAGCCATCTGATCAGTCTCTCCCTTCGATCGGGAGGCCAAGCAACGGCTGGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGAGGAGGTTGTTGTTGTTGGAAGGGAAGAACCTGGAGAAGACTCCGGAGAGAAGGGTAATCATACCAGGAAAGGACGCAACTTGGGTTTGGAAACTCTAGCTGGGGTGGCGTCACCGTTAAGCCCTTCTTTCACTCCTCAAGATAGATGGTACGAGGAAGAGAAAGCTATTCCGCTGAAGAAAAGGAGAGGGGCATTCGAGGAGAATAACAGTGCTGCTACGCACAGCAAGAAGACGAAGGCGAAGATGAAGACGAAGATGAACAAGAAGTGTTCCTCTCGCAACGAGGACAGCACGGAAGAGGAAGATGAAGAAGAGAGAAAAGTGGATGATGTAAACGTGAGTGTGAGCAAGAAGAGGGTAAGGGGTAGTGCACTGATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGGGGATGGAGGTGCTGTCAGCAAACGCTGGTTGGTTACTCGCTGTGTGAGCATCATTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGCTCCATTGCATCAACTGCACCAAAGAAGGTGCACATACACCACCACCATTCTTCTTCTTCTTCTTCTTCTCTTGAGAAGCAAAATCTTAGTGTTGCCGAGCCCTTCGTGGAGGAGGAGGAGGAGGAGGAGAAGCCGGAGATAATCACGAAGAAGAGGATGAAGCTGGGCGTTGTAAAAGCGCGTTCCATAAGCAGCTTGCTAGGACAAACGAACACCCAGATTGCTGCTGTAGCTCATGAGAATAGCAAGTAA 1065 0.5202 MRIRKRPVLFPSSVSPLPLSDPHLISRSPVVVQLSEAASTAAKHSSSAVLHRHAASWSLDRCQPSDQSLPSIGRPSNGWDDPSGIGESGAHRQHNKQDPLEEVVVVGREEPGEDSGEKGNHTRKGRNLGLETLAGVASPLSPSFTPQDRWYEEEKAIPLKKRRGAFEENNSAATHSKKTKAKMKTKMNKKCSSRNEDSTEEEDEEERKVDDVNVSVSKKRVRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKKVHIHHHHSSSSSSSLEKQNLSVAEPFVEEEEEEEKPEIITKKRMKLGVVKARSISSLLGQTNTQIAAVAHENSK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01856 354 PANTHER EXPRESSED PROTEIN-RELATED 111 338 - -
Viun1g01856 354 MobiDBLite consensus disorder prediction 1 22 - -
Viun1g01856 354 ProSiteProfiles WRC domain profile. 226 270 IPR014977 -
Viun1g01856 354 MobiDBLite consensus disorder prediction 273 316 - -
Viun1g01856 354 MobiDBLite consensus disorder prediction 91 125 - -
Viun1g01856 354 Pfam WRC 228 268 IPR014977 -
Viun1g01856 354 MobiDBLite consensus disorder prediction 61 126 - -
Viun1g01856 354 MobiDBLite consensus disorder prediction 162 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01856 Viun-Chr1 30215193 30217836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01856 - - gmx:100810559 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01856 1 30215193 30217836 Viun1g01856 1 30215193 30217836 ECH
Viun1g01856 1 30215193 30217836 Viun7g00307 7 2195579 2198487 PCT