Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01853 ATGGAGAAGATGGAACATTTCAGCCATATCCACCCTCTTCTGTTAAAGCAAGAAAAGACAGATAACAACAACAACAACAACCTAGTCCTTTGCTCAGGTTGTGAAAACCCAATTTCATCAGGTCCTGTCTTCAGCTGCGACAAATGCAACTATATCCTTCACAAAACATGCGTAGAAATTGCACGCCATATCAAACACCCTTTTCACCCTCAGCACCCCCTTGTTCTCCTTTCCACTTCCCCTTATGAGGGACCCTACGTGTGTGATTCCTGCAGAGGCCTCTTCCGAAACTTCGTCTACCATTGTTATACCTGCAGCTATGATCTTGACGTGTCATGTGCTTCTGAGTGCAACCCAGATGATGGCCATAAGCACGACTTCATGTCAGTGACAAATCCACAATCTTTTGTTTGTTATGCTTGCGGCTTGCAAGGAAACGAGGGTCTCGCTTGCCTATGCACCGTTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCTTGCTGTTAGAATAAAAAGCCATGACCACCCTTTGAAGCTCACTTATCTCCTTCATCACATTTATGGTTTCTGGGGTAGCATAACTTGCGGTGTTTGTAATGGAGCAATGAGTTCAGCTTTTGCGGGTTACTTTTGTTCAACCTGCAGATTTCCCGTGCATTTGAAGTGTTTGCAAGAAGATTTAAGAGATGACTGGGCAGTAGAAGATGAGAAATCATCCACGTACTATGAAACTGATGAATCCTTGGATATTGATTTTACTTGTAGTTTCTTTGGTCATGAACATTTGTTGAAGTTGGCGGATGAAGAGAGTGATCTGCGATATTCTGGGAAACTCTGTGATGCGTGTATCCAACCCATCGTGCCACCTTTATTTTCTTGTGAAGAAGAAAATTGTGGCTTCATTTTGCACCAAAGTTGTGTTGAATTACCAAGAACAACGCTACACCCGTTTCATGCACACCCTCTAACTCTTCTCCCCAAGGCACCACATTATGATGGCATTTATAGGTGCGATGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGTTGTGATGTGTGTCAATTCGACCTTGATGTTTGTTGTGGTTCCCTTCGAGAGAGAATTGAACATGAAAGTCACATGCATCCCTTGCTCCTTAAGAAGACAACAGTTGCTAGGCAATGCAAAGGTTGTCATCGTTGGTCGAAGCATGTGCTTGTGTGTGAAGTTTGTGAGGATTTTGCTATTGATTGTGGATGTGCTACTCTACCGCGTGGAGCATGGTGCATGTATGACAAGCATCCTCTAAGTCTAAACTATTTTGTTGAAGAGGGTTTGAGGGAATATGAATGTGGCATTTGCAATGAGAAAATTTGTCCGAAGCAATGGTTTTATTACTGCGATGACTGTGATTATGGTGCTCATCCTTATTGTGTTGAAGGCAAGTGTAGGCTTGTCAAGTTCGGAGGTAGTTTCCAATATGATGTTCATTCACACCCTCTTGCTTTGGTTGAAGAAACTGATGAAAACACTAAATGTGAAGCCTGTGGTGAATGCTGCAACGGCTGGACACTTGAATGTGGGCAATGCAAAAGCTACTTTCACCGTGAAGGACTGTGTTTTTGGAAACAATTTAAGAAGAGTGACAAATATTTTAAGTTGTCTGGAATTATGAGACACAGGTATGCAGCAAACGTGCTAGCCTCCATGCCCAATGTAACCAACAACAAAGCGAAAGGCAGCTGA 1737 0.4283 MEKMEHFSHIHPLLLKQEKTDNNNNNNLVLCSGCENPISSGPVFSCDKCNYILHKTCVEIARHIKHPFHPQHPLVLLSTSPYEGPYVCDSCRGLFRNFVYHCYTCSYDLDVSCASECNPDDGHKHDFMSVTNPQSFVCYACGLQGNEGLACLCTVCQIWVHSSCAELPLAVRIKSHDHPLKLTYLLHHIYGFWGSITCGVCNGAMSSAFAGYFCSTCRFPVHLKCLQEDLRDDWAVEDEKSSTYYETDESLDIDFTCSFFGHEHLLKLADEESDLRYSGKLCDACIQPIVPPLFSCEEENCGFILHQSCVELPRTTLHPFHAHPLTLLPKAPHYDGIYRCDGCKRLSNGFVYRCDVCQFDLDVCCGSLRERIEHESHMHPLLLKKTTVARQCKGCHRWSKHVLVCEVCEDFAIDCGCATLPRGAWCMYDKHPLSLNYFVEEGLREYECGICNEKICPKQWFYYCDDCDYGAHPYCVEGKCRLVKFGGSFQYDVHSHPLALVEETDENTKCEACGECCNGWTLECGQCKSYFHREGLCFWKQFKKSDKYFKLSGIMRHRYAANVLASMPNVTNNKAKGS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01853 578 Pfam C1 domain 319 365 IPR004146 -
Viun1g01853 578 Pfam C1 domain 261 310 IPR004146 -
Viun1g01853 578 Pfam C1 domain 174 225 IPR004146 -
Viun1g01853 578 Pfam C1 domain 7 58 IPR004146 -
Viun1g01853 578 Pfam C1 domain 67 114 IPR004146 -
Viun1g01853 578 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 115 - -
Viun1g01853 578 SUPERFAMILY Cysteine-rich domain 294 379 IPR046349 -
Viun1g01853 578 SUPERFAMILY Cysteine-rich domain 39 115 IPR046349 -
Viun1g01853 578 SUPERFAMILY Cysteine-rich domain 148 226 IPR046349 -
Viun1g01853 578 SUPERFAMILY Cysteine-rich domain 397 482 IPR046349 -
Viun1g01853 578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 94 IPR013083 -
Viun1g01853 578 SMART PHD_3 137 189 IPR001965 -
Viun1g01853 578 SMART PHD_3 447 514 IPR001965 -
Viun1g01853 578 SMART PHD_3 281 344 IPR001965 -
Viun1g01853 578 SMART PHD_3 197 261 IPR001965 -
Viun1g01853 578 SMART PHD_3 30 92 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01853 Viun-Chr1 30190209 30192163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01853 - - vun:114181199 1279.23